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The map label for this gene is slyA [H]

Identifier: 77456398

GI number: 77456398

Start: 205141

End: 205569

Strand: Direct

Name: slyA [H]

Synonym: Pfl01_0170

Alternate gene names: 77456398

Gene position: 205141-205569 (Clockwise)

Preceding gene: 77456397

Following gene: 77456399

Centisome position: 3.19

GC content: 63.17

Gene sequence:

>429_bases
ATGAATATCAGCAGTGCCATGGTGGTGGCCGCCAGGCATTGGCGGAAGATCTGCCAGACCACGCTGGTCAACTATGGAAT
TTCCGAAGCCTGCGCCGTCCCGTTGTTGATGATCGGGCGGCTGGGCGAGGGTGTGCGTCAGGTGCAGGTGGCGCAGGCGG
CGGGGATGGAGTCGCCGTCGCTGGTGCGCCTGCTCGATCAGTTGTGTCACGCCGGTTTTGTCTGCCGCACCGAAGATGCC
CAGGACCGTCGCGCCAAATGCCTGAGCCTGACCGACACCGGCCGTGAGCTGGTGCAAGCGGTGGAGGCGCAACTGGTGCG
TCTGCGTCATGAAGTGCTCGAAGGCATCGACCAGCGCGATCTGGAGGCTACGCTTCGAGTACTGAGAGCTTTCGAGGCGG
CCACTCCGCCAACGGTGATCAATCCGTGA

Upstream 100 bases:

>100_bases
TTCAAAACTTGACTGAATTTCCCCACCAATGCGATATTGATAGTTAGCAAACTAACAGTGTGTGCATTCTTTCGTGCCGA
ATAACCTCGACGCTCTCCAG

Downstream 100 bases:

>100_bases
ACGGGTTCTTTTCCGGCATGCCCCCCGCGCGGGACTGGTTCTACGGGATCCGCACGTTCGCGGCCTCGATGACCGCGCTG
TACATCGCCTTGCTCATGCA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNISSAMVVAARHWRKICQTTLVNYGISEACAVPLLMIGRLGEGVRQVQVAQAAGMESPSLVRLLDQLCHAGFVCRTEDA
QDRRAKCLSLTDTGRELVQAVEAQLVRLRHEVLEGIDQRDLEATLRVLRAFEAATPPTVINP

Sequences:

>Translated_142_residues
MNISSAMVVAARHWRKICQTTLVNYGISEACAVPLLMIGRLGEGVRQVQVAQAAGMESPSLVRLLDQLCHAGFVCRTEDA
QDRRAKCLSLTDTGRELVQAVEAQLVRLRHEVLEGIDQRDLEATLRVLRAFEAATPPTVINP
>Mature_142_residues
MNISSAMVVAARHWRKICQTTLVNYGISEACAVPLLMIGRLGEGVRQVQVAQAAGMESPSLVRLLDQLCHAGFVCRTEDA
QDRRAKCLSLTDTGRELVQAVEAQLVRLRHEVLEGIDQRDLEATLRVLRAFEAATPPTVINP

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=130, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15605; Mature: 15605

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISSAMVVAARHWRKICQTTLVNYGISEACAVPLLMIGRLGEGVRQVQVAQAAGMESPS
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LVRLLDQLCHAGFVCRTEDAQDRRAKCLSLTDTGRELVQAVEAQLVRLRHEVLEGIDQRD
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEATLRVLRAFEAATPPTVINP
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNISSAMVVAARHWRKICQTTLVNYGISEACAVPLLMIGRLGEGVRQVQVAQAAGMESPS
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LVRLLDQLCHAGFVCRTEDAQDRRAKCLSLTDTGRELVQAVEAQLVRLRHEVLEGIDQRD
HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEATLRVLRAFEAATPPTVINP
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA