| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is engB
Identifier: 77456283
GI number: 77456283
Start: 60118
End: 60762
Strand: Direct
Name: engB
Synonym: Pfl01_0055
Alternate gene names: 77456283
Gene position: 60118-60762 (Clockwise)
Preceding gene: 77456275
Following gene: 77456285
Centisome position: 0.93
GC content: 57.98
Gene sequence:
>645_bases ATGCAACTCAAGAATCCCATCCTCGGCCTGTGCCAACAGTCCACGTTCATGCTCAGTGCCGCCAAAGTCGATCAGTGCCC CGACGACGAAGGCTTCGAAGTGGCGTTCGCCGGTCGTTCCAACGCCGGTAAATCCAGTGCGCTGAACACTCTGACTCACG CCAGCCTGGCGCGCACCTCGAAAACCCCGGGTCGCACACAGCTGTTGAACTTCTTCAAGCTAGACGATGAACGGCGTCTG GTCGACCTCCCGGGCTACGGTTATGCAAAAGTACCAATCCCGCTGAAGCAACACTGGCAGCGTCACCTTGAGGCTTACCT CGGTGGCCGCGAGAGTTTGAAGGGGCTGATTCTGATGATGGACATCCGTCATCCAATGACCGACTTCGACCTGCTGATGC TGGACTGGGCCGTTGCCGCCGGCATGCCGATGCACATTCTGCTGACCAAGGCAGACAAGCTGACCTACGGCGCAGCCAAG AACACGCTGCTCAAGGTGCAGTCGGAAATCCGTAAGGGTTGGGGCGATCAAGTGACGATCCAGCTGTTCTCCGCACCAAA ACGCATGGGCCTGGAAGAGGCTTACACTGTGTTGGCGGGCTGGATGGAGTTGGCGGATAAAGGCGCTGAATTGCCTGCTG AGTAA
Upstream 100 bases:
>100_bases AGCACACACAAAATCTGCGGCATTATATACTGGCGTCACTGAAACGGAAGCGACACCGCGTTCCGCGCCTAATCCCGGCG CCGCCCACATCGGAAATCCC
Downstream 100 bases:
>100_bases ATCGCAGGCAAAAAAAGCCCCGGACTTCATATGGGGAGGGAGAAGTTCCGGGGTTTAAGTTCCGAACCGCTAGGGCGGGG TTCAGATATCTGCCAACACT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE
Sequences:
>Translated_214_residues MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE >Mature_214_residues MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI145693205, Length=192, Percent_Identity=54.1666666666667, Blast_Score=204, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320543, Length=129, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_PSEPF (Q3KKA7)
Other databases:
- EMBL: CP000094 - RefSeq: YP_345788.1 - ProteinModelPortal: Q3KKA7 - SMR: Q3KKA7 - STRING: Q3KKA7 - GeneID: 3717491 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_0055 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: THFVTSA - ProtClustDB: PRK00454 - BioCyc: PFLU205922:PFL_0055-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23748; Mature: 23748
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTS CCCCCHHHHHHCCHHHEEEHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC KTPGRTQLLNFFKLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMM CCCCHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCHHHHCEEEEEE DIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTI ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCEEEE QLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE EEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTS CCCCCHHHHHHCCHHHEEEHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC KTPGRTQLLNFFKLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMM CCCCHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCHHHHCEEEEEE DIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTI ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCEEEE QLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE EEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA