| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is pcaD [H]
Identifier: 77454603
GI number: 77454603
Start: 44189
End: 44992
Strand: Direct
Name: pcaD [H]
Synonym: pREL1_0036
Alternate gene names: 77454603
Gene position: 44189-44992 (Clockwise)
Preceding gene: 77454602
Following gene: 77454606
Centisome position: 16.27
GC content: 60.95
Gene sequence:
>804_bases GTGCCGAACGTGAGAACGCCCGACGCCGATATCTATTACACCGACAGTGGGGGAGAGGGGCCCGTCCTGCTGCTCGGGCA TGGATTCTTCATGGATTCGTCGATGTTCGCCCCGCAGATCGATGCCCTCGCCGGCAATGTCAGGGTGGTTGCCTGGGACT CGCGCAGGCACGGACGAACAACCGATCACGGCGCCGCATTCACGTATTGGGATTTGGCTCGAGACTCCCTGGCGGTCCTC GACGATCTCGAGATCGAGACAGCAATCGTCGGCGGAATGTCGCAGGGCGGTTACACCGCGCTACGGACGGCTTTGCTCGC TCCCGAGAGAGTCCAAGCGCTCCTGCTACTCGACACCGAAGCATCTGCCTGCACCGATGGCGAGAAAGCCGGATACAAGG CCATGTTCGATCAGTGGTGCAGCGATGCCCCGATCGAACCGCTTGTCGAAGCTCTGGCACCGCAATTGATCGGTGGTGAC TCGCGAGAGTCGTGGGCGCCGTGGATCGAGAAATGGACGACTAGCGATCGTCGAGCGATTCGGCCGGCCGCAGAGTGCTT GATCGAACGCGACGATGTCGTCGACCGGTTGAGTGCTATCGAGGTGCCGGCGTTGATCATCCGTGGCGAACACGACATGT CCGCGCCTGCGGTCAAAGCAAAACAGTTGTACGACCATTTACCGCTCGCAGTTCCAGTCCTCACCATTCCTGGCGCAGGT CACGCCGCCAATTGGACCCACCCGCAGCCCGTGAACGAGACCATTGCGGCCTTCGTGACGATGGTTGAAACAGGCTGGTT GTAG
Upstream 100 bases:
>100_bases CTGGATCTTCCCACGGAGCCTGAAAATCTACCGCTCCCGTGTATGCACGTGAGCGGACTCGAATCCCCGGTCGGAAAAGG TCACCCCTAGTATCGGGTTC
Downstream 100 bases:
>100_bases AGGTTTGAGCAGCTATTCGGTTCCCGGGATTCGCACGCCTAGGTACATCTGTACGGGGTAGTCACCACGCATTTCCGTGT GTACCTGGACGTGAACGCGA
Product: alpha/beta family hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase I; Beta-ketoadipate enol-lactone hydrolase I; Enol-lactone hydrolase I [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPNVRTPDADIYYTDSGGEGPVLLLGHGFFMDSSMFAPQIDALAGNVRVVAWDSRRHGRTTDHGAAFTYWDLARDSLAVL DDLEIETAIVGGMSQGGYTALRTALLAPERVQALLLLDTEASACTDGEKAGYKAMFDQWCSDAPIEPLVEALAPQLIGGD SRESWAPWIEKWTTSDRRAIRPAAECLIERDDVVDRLSAIEVPALIIRGEHDMSAPAVKAKQLYDHLPLAVPVLTIPGAG HAANWTHPQPVNETIAAFVTMVETGWL
Sequences:
>Translated_267_residues MPNVRTPDADIYYTDSGGEGPVLLLGHGFFMDSSMFAPQIDALAGNVRVVAWDSRRHGRTTDHGAAFTYWDLARDSLAVL DDLEIETAIVGGMSQGGYTALRTALLAPERVQALLLLDTEASACTDGEKAGYKAMFDQWCSDAPIEPLVEALAPQLIGGD SRESWAPWIEKWTTSDRRAIRPAAECLIERDDVVDRLSAIEVPALIIRGEHDMSAPAVKAKQLYDHLPLAVPVLTIPGAG HAANWTHPQPVNETIAAFVTMVETGWL >Mature_266_residues PNVRTPDADIYYTDSGGEGPVLLLGHGFFMDSSMFAPQIDALAGNVRVVAWDSRRHGRTTDHGAAFTYWDLARDSLAVLD DLEIETAIVGGMSQGGYTALRTALLAPERVQALLLLDTEASACTDGEKAGYKAMFDQWCSDAPIEPLVEALAPQLIGGDS RESWAPWIEKWTTSDRRAIRPAAECLIERDDVVDRLSAIEVPALIIRGEHDMSAPAVKAKQLYDHLPLAVPVLTIPGAGH AANWTHPQPVNETIAAFVTMVETGWL
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29005; Mature: 28874
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVRTPDADIYYTDSGGEGPVLLLGHGFFMDSSMFAPQIDALAGNVRVVAWDSRRHGRT CCCCCCCCCCEEEECCCCCCCEEEEECCEEECCCCCCCCHHHHCCCEEEEEECCCCCCCC TDHGAAFTYWDLARDSLAVLDDLEIETAIVGGMSQGGYTALRTALLAPERVQALLLLDTE CCCCCEEEEHHHCCCHHHHHHCCCHHHHEECCCCCCCHHHHHHHHCCHHHEEEEEEEECC ASACTDGEKAGYKAMFDQWCSDAPIEPLVEALAPQLIGGDSRESWAPWIEKWTTSDRRAI CCCCCCCHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHH RPAAECLIERDDVVDRLSAIEVPALIIRGEHDMSAPAVKAKQLYDHLPLAVPVLTIPGAG HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCC HAANWTHPQPVNETIAAFVTMVETGWL CCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PNVRTPDADIYYTDSGGEGPVLLLGHGFFMDSSMFAPQIDALAGNVRVVAWDSRRHGRT CCCCCCCCCEEEECCCCCCCEEEEECCEEECCCCCCCCHHHHCCCEEEEEECCCCCCCC TDHGAAFTYWDLARDSLAVLDDLEIETAIVGGMSQGGYTALRTALLAPERVQALLLLDTE CCCCCEEEEHHHCCCHHHHHHCCCHHHHEECCCCCCCHHHHHHHHCCHHHEEEEEEEECC ASACTDGEKAGYKAMFDQWCSDAPIEPLVEALAPQLIGGDSRESWAPWIEKWTTSDRRAI CCCCCCCHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHH RPAAECLIERDDVVDRLSAIEVPALIIRGEHDMSAPAVKAKQLYDHLPLAVPVLTIPGAG HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCC HAANWTHPQPVNETIAAFVTMVETGWL CCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8181753 [H]