| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454606
Identifier: 77454606
GI number: 77454606
Start: 46737
End: 47441
Strand: Direct
Name: 77454606
Synonym: pREL1_0039
Alternate gene names: NA
Gene position: 46737-47441 (Clockwise)
Preceding gene: 77454603
Following gene: 77454607
Centisome position: 17.21
GC content: 63.4
Gene sequence:
>705_bases ATGGCATCCCTACTGACCAAAAAGATCGATTCCATCCGCTCGTCCGGTGACAAACAACCAGCACACAACGGCGCAGACCC GGATAGCCCACCCGACCTGACTACCCGCGCGCGAGTGCGCAGACGCCCGATCTACCTTGCAATCGGCGTCGCCCTTGTCG TCGTCGCCGTCATCGGCATGCTCGCCGCAGTCAGCGCGATGCGCGCCACGACCGACGTCCTCGTCCTCGCGCGCGACGTC CAACAGGGCCAAATCATCGAATCGAAGGACCTCACGGTGAAAACCGTCAACGTCGACGCCGACCTGGGTGCCCTCTCGGC GGGTGAACGAGGTCGTGTCATCGGAATGAGTGCCGGCACTCGATTGCCGGCAGGAACAGTGCTGATGCCCGCGGCCGTCA CCGACCAGGTGGTGCCCGGAGAAGGCTTGACGATGGTCGGCATCACCGTGGGATACCCACACCTACCGTCGGAAGCAATT CTCCCCGGAGACATGATCCGCGTCGTAGACACACCCCGAGAAGGCGATGACCCGCCGGTTACTGGACCTATCAACACAAA GGCGCAGGTCTACTCGACGACCACGATCGCGGAAGCGGGCGAAACCACTCTCAACCTCCTGGTCCCGGAAGCCGAAGCAA ACTGGGTCGCCGCGCGGGCTGCGACCAAGCGCGTGTCCATCGTCCTCGACAACCGAGTGCGGTGA
Upstream 100 bases:
>100_bases TCTGCAGCGCAGTTGGCGCCAGCCAGTCCAGGTCCCGACCTACTGTCCCCGTACGACCTGCCCACCCTGTCCACTCGTCC ACTGTGAAGGACCACCACAC
Downstream 100 bases:
>100_bases TTTCCCATGTACCTCGCACTCATCTCTGCATCCGGGGCACCAGGAGTCTCCACGACAGCACTCGCTCTGGCCTTGAATTC ACCAAGTAAGAACACGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MASLLTKKIDSIRSSGDKQPAHNGADPDSPPDLTTRARVRRRPIYLAIGVALVVVAVIGMLAAVSAMRATTDVLVLARDV QQGQIIESKDLTVKTVNVDADLGALSAGERGRVIGMSAGTRLPAGTVLMPAAVTDQVVPGEGLTMVGITVGYPHLPSEAI LPGDMIRVVDTPREGDDPPVTGPINTKAQVYSTTTIAEAGETTLNLLVPEAEANWVAARAATKRVSIVLDNRVR
Sequences:
>Translated_234_residues MASLLTKKIDSIRSSGDKQPAHNGADPDSPPDLTTRARVRRRPIYLAIGVALVVVAVIGMLAAVSAMRATTDVLVLARDV QQGQIIESKDLTVKTVNVDADLGALSAGERGRVIGMSAGTRLPAGTVLMPAAVTDQVVPGEGLTMVGITVGYPHLPSEAI LPGDMIRVVDTPREGDDPPVTGPINTKAQVYSTTTIAEAGETTLNLLVPEAEANWVAARAATKRVSIVLDNRVR >Mature_233_residues ASLLTKKIDSIRSSGDKQPAHNGADPDSPPDLTTRARVRRRPIYLAIGVALVVVAVIGMLAAVSAMRATTDVLVLARDVQ QGQIIESKDLTVKTVNVDADLGALSAGERGRVIGMSAGTRLPAGTVLMPAAVTDQVVPGEGLTMVGITVGYPHLPSEAIL PGDMIRVVDTPREGDDPPVTGPINTKAQVYSTTTIAEAGETTLNLLVPEAEANWVAARAATKRVSIVLDNRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24486; Mature: 24354
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLLTKKIDSIRSSGDKQPAHNGADPDSPPDLTTRARVRRRPIYLAIGVALVVVAVIGM CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHH LAAVSAMRATTDVLVLARDVQQGQIIESKDLTVKTVNVDADLGALSAGERGRVIGMSAGT HHHHHHHHHHHHHEEEEECCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC RLPAGTVLMPAAVTDQVVPGEGLTMVGITVGYPHLPSEAILPGDMIRVVDTPREGDDPPV CCCCCCEEECHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCC TGPINTKAQVYSTTTIAEAGETTLNLLVPEAEANWVAARAATKRVSIVLDNRVR CCCCCCCEEEEEEEEHHCCCCCEEEEEEECCCCCEEEEHHHCEEEEEEECCCCC >Mature Secondary Structure ASLLTKKIDSIRSSGDKQPAHNGADPDSPPDLTTRARVRRRPIYLAIGVALVVVAVIGM CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHH LAAVSAMRATTDVLVLARDVQQGQIIESKDLTVKTVNVDADLGALSAGERGRVIGMSAGT HHHHHHHHHHHHHEEEEECCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCC RLPAGTVLMPAAVTDQVVPGEGLTMVGITVGYPHLPSEAILPGDMIRVVDTPREGDDPPV CCCCCCEEECHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCC TGPINTKAQVYSTTTIAEAGETTLNLLVPEAEANWVAARAATKRVSIVLDNRVR CCCCCCCEEEEEEEEHHCCCCCEEEEEEECCCCCEEEEHHHCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA