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The map label for this gene is ybeQ [H]

Identifier: 76818918

GI number: 76818918

Start: 302814

End: 303560

Strand: Direct

Name: ybeQ [H]

Synonym: BURPS1710b_A0199

Alternate gene names: 76818918

Gene position: 302814-303560 (Clockwise)

Preceding gene: 76817444

Following gene: 76819202

Centisome position: 9.52

GC content: 72.96

Gene sequence:

>747_bases
GTGGCGCGCGCGGTATCGTTGAAGGCGCTCGCGGCGGCGTCGCGCGAGGATCTCGCCGGGATTCTCGCGGGCGCGCCCGA
GCGGGCGGCCGCATGGGTCGCGGCGGCCGCGCAGAACGGCATCGTCGAGGCGCAGGCCGTCTACGGGCAGTACCTGCTCG
ACGGCCACGGCGTCGCGCGCGACGCTGCCGCCGCGCTCGAATGGTTCAAGCACGCGGCGCGCGCCGACCATCCGATGGCG
ATGAACATGGTCGGCCGCTGCTACGAATTCGGCTGGGGCACGGCCGCGAGCGCGGCCGTCGCCGTGTACTGGTACCGCGA
GGCCGCGCGCGCGGGGCTCGACTGGGGGATGTACAACTACGCGACGATGCTCGCGCTCGGCAACGGCGTGGACGAAGATC
GCGCGGCCGCGCTCGCATGGTTCGAGAAGGCGGCGGCGCTCGGCCACGCGAAATCGATCAACCTGATCGGCGGCTTCCAC
GAAGACGGCTGGGTCGTCGCGGCCGACCGCGACGCCGCGTTCGACTGCTACCGGCGCGCGGCCGCCGCGGGCGACTTTCG
CGGCCAGTTCAACTATGCGCGGCTGCTCGCCGAACGCGGGCGCGTCGCGGAAGCGCTCGAATGGCTCGCGCGCGTGCCGC
GCACCGCGACGCCCGCGTTCGTCGCGAAGATGCGCGCGTATCTCGCGGCGTCGCCGATCGACGCGTTTCGCGCGCTCGCC
GCGCGACAGGAGAAATCGGCAACATGA

Upstream 100 bases:

>100_bases
CTGTTCAACCGCACGTACTTCGATCAGGCGTATCCGGCGCACTACGCGTCGATCGCGCCGGGCCGCTCGGCGTTCGTCAC
GCTCAACGCGCGCTATTGAC

Downstream 100 bases:

>100_bases
TGCTTCACATTCCCGGCGTGCTGACGAAGGAACAGGTCGCGCAGTGCCGCGACATCCTCGACGCCGCCGACTGGACCGAC
GGCAATGCGACCTCGGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MARAVSLKALAAASREDLAGILAGAPERAAAWVAAAAQNGIVEAQAVYGQYLLDGHGVARDAAAALEWFKHAARADHPMA
MNMVGRCYEFGWGTAASAAVAVYWYREAARAGLDWGMYNYATMLALGNGVDEDRAAALAWFEKAAALGHAKSINLIGGFH
EDGWVVAADRDAAFDCYRRAAAAGDFRGQFNYARLLAERGRVAEALEWLARVPRTATPAFVAKMRAYLAASPIDAFRALA
ARQEKSAT

Sequences:

>Translated_248_residues
MARAVSLKALAAASREDLAGILAGAPERAAAWVAAAAQNGIVEAQAVYGQYLLDGHGVARDAAAALEWFKHAARADHPMA
MNMVGRCYEFGWGTAASAAVAVYWYREAARAGLDWGMYNYATMLALGNGVDEDRAAALAWFEKAAALGHAKSINLIGGFH
EDGWVVAADRDAAFDCYRRAAAAGDFRGQFNYARLLAERGRVAEALEWLARVPRTATPAFVAKMRAYLAASPIDAFRALA
ARQEKSAT
>Mature_247_residues
ARAVSLKALAAASREDLAGILAGAPERAAAWVAAAAQNGIVEAQAVYGQYLLDGHGVARDAAAALEWFKHAARADHPMAM
NMVGRCYEFGWGTAASAAVAVYWYREAARAGLDWGMYNYATMLALGNGVDEDRAAALAWFEKAAALGHAKSINLIGGFHE
DGWVVAADRDAAFDCYRRAAAAGDFRGQFNYARLLAERGRVAEALEWLARVPRTATPAFVAKMRAYLAASPIDAFRALAA
RQEKSAT

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=203, Percent_Identity=32.0197044334975, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26486; Mature: 26355

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVSLKALAAASREDLAGILAGAPERAAAWVAAAAQNGIVEAQAVYGQYLLDGHGVAR
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
DAAAALEWFKHAARADHPMAMNMVGRCYEFGWGTAASAAVAVYWYREAARAGLDWGMYNY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
ATMLALGNGVDEDRAAALAWFEKAAALGHAKSINLIGGFHEDGWVVAADRDAAFDCYRRA
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHH
AAAGDFRGQFNYARLLAERGRVAEALEWLARVPRTATPAFVAKMRAYLAASPIDAFRALA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
ARQEKSAT
HHHHCCCC
>Mature Secondary Structure 
ARAVSLKALAAASREDLAGILAGAPERAAAWVAAAAQNGIVEAQAVYGQYLLDGHGVAR
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
DAAAALEWFKHAARADHPMAMNMVGRCYEFGWGTAASAAVAVYWYREAARAGLDWGMYNY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
ATMLALGNGVDEDRAAALAWFEKAAALGHAKSINLIGGFHEDGWVVAADRDAAFDCYRRA
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHH
AAAGDFRGQFNYARLLAERGRVAEALEWLARVPRTATPAFVAKMRAYLAASPIDAFRALA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
ARQEKSAT
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]