| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is piuA [H]
Identifier: 76817444
GI number: 76817444
Start: 300566
End: 302812
Strand: Direct
Name: piuA [H]
Synonym: BURPS1710b_A0198
Alternate gene names: 76817444
Gene position: 300566-302812 (Clockwise)
Preceding gene: 162210118
Following gene: 76818918
Centisome position: 9.45
GC content: 66.31
Gene sequence:
>2247_bases ATGAAGTCGCGTTCCGACGAGTTGAAGCTCGGAAAATTCACCACCCTCTGCAGCGTGCTGGCCGCGAGCCCGGCATTCGC GCAGGACGCCGCGCCGCCCGCGGCGAGCGCCGATCACGACAAGGAGCTCGCGCCGATCCAGATCAAGGGCGCCGCCGAAC ACAGCTACAAAGCCGACTTCTCGTCGTCGGTGAAATTCACCGCGCCGCTCGTCGACACGCCGAAATCCGTCACCGTGATT CCGCAGGAACTGATCCACAACAGCGGCGCGGCCACGCTCACCGAAGCGTTGCGCACCGTGCCCGGCATCACGTTCGGCGC GGGCGAAGGCGGCAATCCGCTCGGCGACCGCCCGTTCATCCGCGGCTACGACACGCAGGGCAGCATGTTCGTCGACGGGA TGCGCGACACGGGCGCGACGACGCGCGAGATCTTCAATACCGAGCGCATCGAGATCACGAAAGGCTCGGACGGCGCGTAC GGCGGCCGCGGCGGTGCGGGCGGCAGCATCAACCTCGTCACGAAGGCGCCGCACCTGGGCACGACGGCCGAGGCGAGCGC GGGGCTCGGCACCGACCGCTATCGCCGCTTCACCGCCGACGGCAACTGGCAGTTCGCCGATCACGCGGCGTTCCGCCTGA ACCTGATGAGCCACAACAACGACGTCGCGGGCCGCGACGCCGTGAACAACGAGCGCTGGGGCGTCGCGCCGTCGATCGCG TTCGGGCTCGGCACGCCGACGCGCGTGAGCGCGAGCTATTACCACCTGTCGACCGACGATCTGCCCGACGGCGGCATTCC GTATTTCTACACGACGGCGAACAAGCCGGCGAACGTCGATACGATCTATCCGGCGAACGTCGACCGCCACAACTTCTACG GCCTCGTCAACCGCGACTTCCGCAAGACGACGACGGACATCGGCACGCTGCGCATCGAGCACGACATCACGCCGTCGCTG ACGGTGCGCAACACCACGCGCTACACGGAATCGACGCAGGACTACATTTGGACGCAGCCCGACGACAGCCAGGGCAACGT GGTCAACGGCCGCGTCTGGCGGCGCAACAACAACCGCAATAGCGCGATCAACAGCATCGCGAACCAGACCGAGCTGTTCG GCGAATTCCGCACCGGCCCGTTCAAGCACAGCTTCACGACCGGCATCGAGCTGTCGCGCGAATGGGGCAAGCGCGATTCG TACAGCGTCGCGACCGGCACCGGCAAGATCTGCCAACAGGGCATCGGCGCCGCGTCGGGCTACAACTGCACGAGCCTGGG GTCGCCGAACCCGAACGATCCGTGGGCGGGCTCGATCACGCGCAACAACGACTACGCGCATGCGCGCACCGTCACGAAAT CGCTCTACGGCTTCGACACGGTCGAGCTGAGCAAGCATTGGCAGGTGAACGCCGGCGTGCGCGTCGACGACTACTCGACC CGCTTCACCGACACCCGCGCGAACGGCGGCAAGACCTACACGCGCGACGACACGCTCGTGAACTGGCAGCTCGGCCTCGT GTTCAAGCCCGCGCGCAACGGCAGCGTGTACGCTTCGTACGCGACGTCGTCGACGCCCGCGGGCGCGCTGCTCGGCGAAG GCTCGGAGACGCAGTCGCTCACGCCGGGCCGCGGCGGCGTCGGCGCGAACGCGGATCAGCTCGCGCCGGAGAAGAACCGC AGCATCGAGCTCGGCACCAAATGGAACGTGCTCGACGACAAGCTCTCGCTCACGGCCGCCCTGTTCCAGATCGACACGAC GAACGCGCGCGTCACGCTGCCGAACAACCAGTACGCGATGGTCGGCAACAAGCGCGTGCAGGGGCTCGAGCTCGGCTTCG CTGGGCAGCTCACGCGCGCGTGGCAGGTGTTCGGCGGCTACACCTACATGAAGAGCGAACTGCGCGACAACGGCAGGAAC ACCGCGGACAACGGCCATCAGTTTCCGAACACGCCGAAGCACAGCTTCACGCTGTGGACGAACTACGACGTGACGCCGAA ATTCACCGTCGGCGGCGGCGCGTTCTACATGTCGAAGGTATTCGGCGATACCGCGAACCTGCGCGCCGTGCCGTCATACT GGCGCTTCGACGCGATGGCGCAGTACCGGATCAACAAGAAGCTCGACCTGCAGCTGAACGTGAACAACCTGTTCAACCGC ACGTACTTCGATCAGGCGTATCCGGCGCACTACGCGTCGATCGCGCCGGGCCGCTCGGCGTTCGTCACGCTCAACGCGCG CTATTGA
Upstream 100 bases:
>100_bases AATAGCGCCCGAAAACAATTTGTAATATTCGGGTGAAACGCGTCATGTATCGGCGGCGGCTTCGCCCGATCGAGCCACAC GTGGCGAGGAAATACCACCG
Downstream 100 bases:
>100_bases CGTGGCGCGCGCGGTATCGTTGAAGGCGCTCGCGGCGGCGTCGCGCGAGGATCTCGCCGGGATTCTCGCGGGCGCGCCCG AGCGGGCGGCCGCATGGGTC
Product: outer membrane ferric siderophore receptor
Products: NA
Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MKSRSDELKLGKFTTLCSVLAASPAFAQDAAPPAASADHDKELAPIQIKGAAEHSYKADFSSSVKFTAPLVDTPKSVTVI PQELIHNSGAATLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERIEITKGSDGAY GGRGGAGGSINLVTKAPHLGTTAEASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA FGLGTPTRVSASYYHLSTDDLPDGGIPYFYTTANKPANVDTIYPANVDRHNFYGLVNRDFRKTTTDIGTLRIEHDITPSL TVRNTTRYTESTQDYIWTQPDDSQGNVVNGRVWRRNNNRNSAINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDS YSVATGTGKICQQGIGAASGYNCTSLGSPNPNDPWAGSITRNNDYAHARTVTKSLYGFDTVELSKHWQVNAGVRVDDYST RFTDTRANGGKTYTRDDTLVNWQLGLVFKPARNGSVYASYATSSTPAGALLGEGSETQSLTPGRGGVGANADQLAPEKNR SIELGTKWNVLDDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGFAGQLTRAWQVFGGYTYMKSELRDNGRN TADNGHQFPNTPKHSFTLWTNYDVTPKFTVGGGAFYMSKVFGDTANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR TYFDQAYPAHYASIAPGRSAFVTLNARY
Sequences:
>Translated_748_residues MKSRSDELKLGKFTTLCSVLAASPAFAQDAAPPAASADHDKELAPIQIKGAAEHSYKADFSSSVKFTAPLVDTPKSVTVI PQELIHNSGAATLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERIEITKGSDGAY GGRGGAGGSINLVTKAPHLGTTAEASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA FGLGTPTRVSASYYHLSTDDLPDGGIPYFYTTANKPANVDTIYPANVDRHNFYGLVNRDFRKTTTDIGTLRIEHDITPSL TVRNTTRYTESTQDYIWTQPDDSQGNVVNGRVWRRNNNRNSAINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDS YSVATGTGKICQQGIGAASGYNCTSLGSPNPNDPWAGSITRNNDYAHARTVTKSLYGFDTVELSKHWQVNAGVRVDDYST RFTDTRANGGKTYTRDDTLVNWQLGLVFKPARNGSVYASYATSSTPAGALLGEGSETQSLTPGRGGVGANADQLAPEKNR SIELGTKWNVLDDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGFAGQLTRAWQVFGGYTYMKSELRDNGRN TADNGHQFPNTPKHSFTLWTNYDVTPKFTVGGGAFYMSKVFGDTANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR TYFDQAYPAHYASIAPGRSAFVTLNARY >Mature_748_residues MKSRSDELKLGKFTTLCSVLAASPAFAQDAAPPAASADHDKELAPIQIKGAAEHSYKADFSSSVKFTAPLVDTPKSVTVI PQELIHNSGAATLTEALRTVPGITFGAGEGGNPLGDRPFIRGYDTQGSMFVDGMRDTGATTREIFNTERIEITKGSDGAY GGRGGAGGSINLVTKAPHLGTTAEASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA FGLGTPTRVSASYYHLSTDDLPDGGIPYFYTTANKPANVDTIYPANVDRHNFYGLVNRDFRKTTTDIGTLRIEHDITPSL TVRNTTRYTESTQDYIWTQPDDSQGNVVNGRVWRRNNNRNSAINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDS YSVATGTGKICQQGIGAASGYNCTSLGSPNPNDPWAGSITRNNDYAHARTVTKSLYGFDTVELSKHWQVNAGVRVDDYST RFTDTRANGGKTYTRDDTLVNWQLGLVFKPARNGSVYASYATSSTPAGALLGEGSETQSLTPGRGGVGANADQLAPEKNR SIELGTKWNVLDDKLSLTAALFQIDTTNARVTLPNNQYAMVGNKRVQGLELGFAGQLTRAWQVFGGYTYMKSELRDNGRN TADNGHQFPNTPKHSFTLWTNYDVTPKFTVGGGAFYMSKVFGDTANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR TYFDQAYPAHYASIAPGRSAFVTLNARY
Specific function: Probably involved in iron transport [H]
COG id: COG4774
COG function: function code P; Outer membrane receptor for monomeric catechols
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787024, Length=751, Percent_Identity=37.017310252996, Blast_Score=426, Evalue=1e-120, Organism=Escherichia coli, GI1787344, Length=755, Percent_Identity=24.9006622516556, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1786344, Length=769, Percent_Identity=22.1066319895969, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1787723, Length=204, Percent_Identity=28.921568627451, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81632; Mature: 81632
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRSDELKLGKFTTLCSVLAASPAFAQDAAPPAASADHDKELAPIQIKGAAEHSYKADF CCCCCCCEECHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC SSSVKFTAPLVDTPKSVTVIPQELIHNSGAATLTEALRTVPGITFGAGEGGNPLGDRPFI CCCEEEEECCCCCCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEE RGYDTQGSMFVDGMRDTGATTREIFNTERIEITKGSDGAYGGRGGAGGSINLVTKAPHLG EEECCCCCEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC TTAEASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA CCCCCCCCCCHHHHEEEECCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE FGLGTPTRVSASYYHLSTDDLPDGGIPYFYTTANKPANVDTIYPANVDRHNFYGLVNRDF ECCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCEEEEECCCH RKTTTDIGTLRIEHDITPSLTVRNTTRYTESTQDYIWTQPDDSQGNVVNGRVWRRNNNRN HHHCCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCEEECEEEECCCCCH SAINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDSYSVATGTGKICQQGIGAASG HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCEEECCCHHHHHHCCCCCCC YNCTSLGSPNPNDPWAGSITRNNDYAHARTVTKSLYGFDTVELSKHWQVNAGVRVDDYST CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECCCEEECCCEEECCCCC RFTDTRANGGKTYTRDDTLVNWQLGLVFKPARNGSVYASYATSSTPAGALLGEGSETQSL EEECCCCCCCCEEECCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCC TPGRGGVGANADQLAPEKNRSIELGTKWNVLDDKLSLTAALFQIDTTNARVTLPNNQYAM CCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCHHEEEEEEEEEECCCCEEEECCCCEEE VGNKRVQGLELGFAGQLTRAWQVFGGYTYMKSELRDNGRNTADNGHQFPNTPKHSFTLWT ECCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NYDVTPKFTVGGGAFYMSKVFGDTANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR CCCCCEEEEECCCHHHHHHHHCCCCCCEECCCHHHHHHHEEEECCCEEEEEECHHHHHCH TYFDQAYPAHYASIAPGRSAFVTLNARY HHCCCCCCCHHHCCCCCCEEEEEEEECC >Mature Secondary Structure MKSRSDELKLGKFTTLCSVLAASPAFAQDAAPPAASADHDKELAPIQIKGAAEHSYKADF CCCCCCCEECHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC SSSVKFTAPLVDTPKSVTVIPQELIHNSGAATLTEALRTVPGITFGAGEGGNPLGDRPFI CCCEEEEECCCCCCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCEE RGYDTQGSMFVDGMRDTGATTREIFNTERIEITKGSDGAYGGRGGAGGSINLVTKAPHLG EEECCCCCEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC TTAEASAGLGTDRYRRFTADGNWQFADHAAFRLNLMSHNNDVAGRDAVNNERWGVAPSIA CCCCCCCCCCHHHHEEEECCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE FGLGTPTRVSASYYHLSTDDLPDGGIPYFYTTANKPANVDTIYPANVDRHNFYGLVNRDF ECCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCEEEEECCCH RKTTTDIGTLRIEHDITPSLTVRNTTRYTESTQDYIWTQPDDSQGNVVNGRVWRRNNNRN HHHCCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCEEECEEEECCCCCH SAINSIANQTELFGEFRTGPFKHSFTTGIELSREWGKRDSYSVATGTGKICQQGIGAASG HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCEEECCCHHHHHHCCCCCCC YNCTSLGSPNPNDPWAGSITRNNDYAHARTVTKSLYGFDTVELSKHWQVNAGVRVDDYST CCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECCCEEECCCEEECCCCC RFTDTRANGGKTYTRDDTLVNWQLGLVFKPARNGSVYASYATSSTPAGALLGEGSETQSL EEECCCCCCCCEEECCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCC TPGRGGVGANADQLAPEKNRSIELGTKWNVLDDKLSLTAALFQIDTTNARVTLPNNQYAM CCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCHHEEEEEEEEEECCCCEEEECCCCEEE VGNKRVQGLELGFAGQLTRAWQVFGGYTYMKSELRDNGRNTADNGHQFPNTPKHSFTLWT ECCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NYDVTPKFTVGGGAFYMSKVFGDTANLRAVPSYWRFDAMAQYRINKKLDLQLNVNNLFNR CCCCCEEEEECCCHHHHHHHHCCCCCCEECCCHHHHHHHEEEECCCEEEEEECHHHHHCH TYFDQAYPAHYASIAPGRSAFVTLNARY HHCCCCCCCHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12910271; 10079522 [H]