| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909791
Identifier: 75909791
GI number: 75909791
Start: 4467191
End: 4468615
Strand: Direct
Name: 75909791
Synonym: Ava_3586
Alternate gene names: NA
Gene position: 4467191-4468615 (Clockwise)
Preceding gene: 75909790
Following gene: 75909792
Centisome position: 70.18
GC content: 46.95
Gene sequence:
>1425_bases ATGTCAAGGGTGACGGAAGAACGTAGGTCAAGAGAGCAGCCACTTGATCTAGAACAACCTAAGATTTGGTGGGGTCTTGC TGTAGCCCTACCAGTAGCCGTGGCTGCGGGGTTACTAGCTACAGCTAAATTTGAGCAATTAAAAAGGCTAGGCCCATCCG TACCTGTTAAACCAGTCGTTACAAGTGTTAGTGCTGTGGGACGTTTAGAACCGCAAGGGGAAGTAATTAAACTTTCGGCT CCCGTGGGAGGAATGCAATCCGCATCACGAGTTAAACAACTTTTTGTAAAAGAGGGAGAACGTGTTAGGAAGGGTCAAAT CATAGCAATTTTGGATAATCACGATACCCAACTAGCGGCCGTGGAAGAAGCGAAAGCCAAATTACTGGAATCTCGCGCTA ACTTGGCTCAAGTCCGGGTTGGTTCCCCCAGGGATATCCAAGCGCAAACCGCCGTAATTGCTCGCTTACAGGCGCAGTTA GTTGGTGAAAGGGATGCTCAACAAGCAACTATTACGCGTATCGCATCCCAATTGAGTGCGGAAAAAGTAGCGCAACAAGC ATTAGTTAACCGCTTAGAAGCAGAACTCTTAGGACAGCAAGACAGTTTAAGAGCCACTCTGAACCGCATTAGAGCCGAGC AACGTAACGCTCAAGTGGATGCGGGGCGCTACGATTTTCTCTACCGGGAAGGTGCTATTTCCCAGCAAGAGCGAGATAGA AGGCGATTAACGGCGACTACTGCTAATCAACAGGTAATTGAAAGTCAAGCCACCTTGAGACAGGCGCTAGCCACTCTCAG ACAGCAAGTTGCTGAGGCTAGAGCTAATCAGATGAAAACTCTAGCCAGTTTGCAACAGCAACTCATCGAAGCGAGAGTTA CCCGTGACAAAACCGTAGCGACATTACAAAGACAAATTGACGAAGAAAAAGCCAGGCTGAAAAGATTGGTGGAAGTTAGT CCTACTGATGTGCAGATGGCTCAAGCTCAAGTTAGTAATGCGATCGCCAACGTCAGAAAAGCCGAAGCCGAATTAAAATT AAGCTACATTCAAGCACCCTCGGCGGGAGAAATCTTAAAAATTTATAGCAAGTCGGGAGAAGCCATCACCGCCGACGGTA TCGCCGAAATGGGAGAAACCGAGCAAATGATGATTATTGCTGAGGTTCCTGAAGACAGTATTGGTCGGGTACGCATAGGC CAAAATGTCACAGCCAGCAGCGATAACGGAGCCTTTAGCGGGGAAATCAGAGGAACAGTCACCGAAATTGGCAGAAAAAT TGGCAAAAAAGATGTCTTAAATACAGATCCAGCAGCTGATGTTGATGCCAGAGTTGTTGAAGTCAAAATTGCCTTATCAC CGGAAGACAGCCAAAAAGTCTCTGGTTTAACCTACGCCAAGGTAGTGGTTGACATTAATAAATAA
Upstream 100 bases:
>100_bases AGTTCTGTAGGCGGGTTTCCCGCCGTAGGAAACTTTTCAAGACGAATTTTGAATTGGTATTACTTTCATCAGCAAAATTC AGATAAACGGACAAAAAACC
Downstream 100 bases:
>100_bases TCAATTTTCCGTTGATGAGAAAATCCACATAATTACGGAAATGAATCGTAAAAGAATCCCTCTATCTTGGTTACAATTAA CGCGAGAAAAAACTCGCCTA
Product: secretion protein HlyD
Products: NA
Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; ABC-Transporter Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Transporter MFP Family; Membrane Fusion Protein Family Protein; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSRVTEERRSREQPLDLEQPKIWWGLAVALPVAVAAGLLATAKFEQLKRLGPSVPVKPVVTSVSAVGRLEPQGEVIKLSA PVGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQLAAVEEAKAKLLESRANLAQVRVGSPRDIQAQTAVIARLQAQL VGERDAQQATITRIASQLSAEKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAISQQERDR RRLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVTRDKTVATLQRQIDEEKARLKRLVEVS PTDVQMAQAQVSNAIANVRKAEAELKLSYIQAPSAGEILKIYSKSGEAITADGIAEMGETEQMMIIAEVPEDSIGRVRIG QNVTASSDNGAFSGEIRGTVTEIGRKIGKKDVLNTDPAADVDARVVEVKIALSPEDSQKVSGLTYAKVVVDINK
Sequences:
>Translated_474_residues MSRVTEERRSREQPLDLEQPKIWWGLAVALPVAVAAGLLATAKFEQLKRLGPSVPVKPVVTSVSAVGRLEPQGEVIKLSA PVGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQLAAVEEAKAKLLESRANLAQVRVGSPRDIQAQTAVIARLQAQL VGERDAQQATITRIASQLSAEKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAISQQERDR RRLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVTRDKTVATLQRQIDEEKARLKRLVEVS PTDVQMAQAQVSNAIANVRKAEAELKLSYIQAPSAGEILKIYSKSGEAITADGIAEMGETEQMMIIAEVPEDSIGRVRIG QNVTASSDNGAFSGEIRGTVTEIGRKIGKKDVLNTDPAADVDARVVEVKIALSPEDSQKVSGLTYAKVVVDINK >Mature_473_residues SRVTEERRSREQPLDLEQPKIWWGLAVALPVAVAAGLLATAKFEQLKRLGPSVPVKPVVTSVSAVGRLEPQGEVIKLSAP VGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQLAAVEEAKAKLLESRANLAQVRVGSPRDIQAQTAVIARLQAQLV GERDAQQATITRIASQLSAEKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAISQQERDRR RLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVTRDKTVATLQRQIDEEKARLKRLVEVSP TDVQMAQAQVSNAIANVRKAEAELKLSYIQAPSAGEILKIYSKSGEAITADGIAEMGETEQMMIIAEVPEDSIGRVRIGQ NVTASSDNGAFSGEIRGTVTEIGRKIGKKDVLNTDPAADVDARVVEVKIALSPEDSQKVSGLTYAKVVVDINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51688; Mature: 51556
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTEERRSREQPLDLEQPKIWWGLAVALPVAVAAGLLATAKFEQLKRLGPSVPVKPVV CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TSVSAVGRLEPQGEVIKLSAPVGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQLAA HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH VEEAKAKLLESRANLAQVRVGSPRDIQAQTAVIARLQAQLVGERDAQQATITRIASQLSA HHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAISQQERDR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCHHHHHH RRLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVTRDKTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH TLQRQIDEEKARLKRLVEVSPTDVQMAQAQVSNAIANVRKAEAELKLSYIQAPSAGEILK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCE IYSKSGEAITADGIAEMGETEQMMIIAEVPEDSIGRVRIGQNVTASSDNGAFSGEIRGTV EECCCCCEEECCCHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCHHH TEIGRKIGKKDVLNTDPAADVDARVVEVKIALSPEDSQKVSGLTYAKVVVDINK HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCEEEEEEEEECC >Mature Secondary Structure SRVTEERRSREQPLDLEQPKIWWGLAVALPVAVAAGLLATAKFEQLKRLGPSVPVKPVV CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TSVSAVGRLEPQGEVIKLSAPVGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQLAA HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHH VEEAKAKLLESRANLAQVRVGSPRDIQAQTAVIARLQAQLVGERDAQQATITRIASQLSA HHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAISQQERDR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCHHHHHH RRLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVTRDKTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH TLQRQIDEEKARLKRLVEVSPTDVQMAQAQVSNAIANVRKAEAELKLSYIQAPSAGEILK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCE IYSKSGEAITADGIAEMGETEQMMIIAEVPEDSIGRVRIGQNVTASSDNGAFSGEIRGTV EECCCCCEEECCCHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCHHH TEIGRKIGKKDVLNTDPAADVDARVVEVKIALSPEDSQKVSGLTYAKVVVDINK HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA