Click here to switch to the map view.

The map label for this gene is 75909792

Identifier: 75909792

GI number: 75909792

Start: 4468656

End: 4469813

Strand: Direct

Name: 75909792

Synonym: Ava_3587

Alternate gene names: NA

Gene position: 4468656-4469813 (Clockwise)

Preceding gene: 75909791

Following gene: 75909793

Centisome position: 70.2

GC content: 37.74

Gene sequence:

>1158_bases
ATGAATCGTAAAAGAATCCCTCTATCTTGGTTACAATTAACGCGAGAAAAAACTCGCCTAGCCGTTGCTCTTGCGGGAAT
TGCCTTTGCTGATATTCTCATGTTTATGCAAATCGGTTTCCGCGATGCTCTTTACTATAGTAACGTTCGCTTACATACAA
GTTTGCAAGGCGATATTGTTTTAATTAATAAACAATCCAACGCCGTATTAGCAATGAAACCCTTCTCACAACGGCGCTTG
TATAAGTCTTTAGAGCTACCATCAGTCCAATCAGTACATCCTATTTATTTAGATTACTCAATTTGGAAAAATCCCTACAC
TGGTCTAACTCGTAGTATTTTGGTTTTTGGAATTAATCCAGAAACTAATATATTGAACTTGGCAGGAGTTCAGGAGAATT
TAGATAAGCTTAAACTACCTGATGCTGTTTTATTCGACCGTTCTTCTAGACCAGAATATGGACCGATCGCCAAGAATTTT
GAGCAAGGCCAGAGTATTTCGGCTGAAGTGCGCCGTAGACGCATAAATGTTGTTGGTCTTTTTACCTTGGGTGCATCTTT
TGGCGCAGATGGTAATTTAGTTACTAGCGATGTTAACTTTTTGCGGCTATTTCCTCTCCGTCGGCAAGGCTTAATTGATA
TTGGCTTAGTTAGATTAAAACCAGGGGTAAATCCGAATACTGCTGTTCAAGAATTACGGAGTTATTTACCTGACGATATC
AACGTATTAACTAAACAAGAATTTATTGATTTTGAGCGTAATTATTGGGCAAGTAGTACAGCTATTGGTTTTATTTTTAC
CTTAGGAACAATCATGGGTTTTATTGTTGGTACGGTAATTGTTTATCAAATTCTCTATACAGAAGTTGCTGATCATTTAT
CTGAATACGCTACTTTAAAAGCAATAGGATATACCCAAAAATATCTATTAGGTGTAATTTTACAAGAAGCATTACTATTA
GCTTGCTTGGGTTATTTACCTGGGTGGGTTTTTGCTATGGTTCTATATCAAACTGCTAGACAAGCTACATTGTTGCCTGT
ATTCATGAGCTATGATCGCGCTATTACAGTGCTGATTCTCACCATGATTATGTGTTTTGTTTCCGGCTCAATTGCTGTAC
GTAAACTACGTTCCGCCGACCCAGCAGATATTTTCTAG

Upstream 100 bases:

>100_bases
GACAGCCAAAAAGTCTCTGGTTTAACCTACGCCAAGGTAGTGGTTGACATTAATAAATAATCAATTTTCCGTTGATGAGA
AAATCCACATAATTACGGAA

Downstream 100 bases:

>100_bases
AAGTATAAATTAAAAATTAATCATGAAAAATATTTCAATACCAAATTTTATAACTCCAGTACTAAAAAATTTATATTATA
ATTTTGAATTTTGAATTTTA

Product: DevC protein

Products: NA

Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC-Type Export System Membrane Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter Permease Protein; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNRKRIPLSWLQLTREKTRLAVALAGIAFADILMFMQIGFRDALYYSNVRLHTSLQGDIVLINKQSNAVLAMKPFSQRRL
YKSLELPSVQSVHPIYLDYSIWKNPYTGLTRSILVFGINPETNILNLAGVQENLDKLKLPDAVLFDRSSRPEYGPIAKNF
EQGQSISAEVRRRRINVVGLFTLGASFGADGNLVTSDVNFLRLFPLRRQGLIDIGLVRLKPGVNPNTAVQELRSYLPDDI
NVLTKQEFIDFERNYWASSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLSEYATLKAIGYTQKYLLGVILQEALLL
ACLGYLPGWVFAMVLYQTARQATLLPVFMSYDRAITVLILTMIMCFVSGSIAVRKLRSADPADIF

Sequences:

>Translated_385_residues
MNRKRIPLSWLQLTREKTRLAVALAGIAFADILMFMQIGFRDALYYSNVRLHTSLQGDIVLINKQSNAVLAMKPFSQRRL
YKSLELPSVQSVHPIYLDYSIWKNPYTGLTRSILVFGINPETNILNLAGVQENLDKLKLPDAVLFDRSSRPEYGPIAKNF
EQGQSISAEVRRRRINVVGLFTLGASFGADGNLVTSDVNFLRLFPLRRQGLIDIGLVRLKPGVNPNTAVQELRSYLPDDI
NVLTKQEFIDFERNYWASSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLSEYATLKAIGYTQKYLLGVILQEALLL
ACLGYLPGWVFAMVLYQTARQATLLPVFMSYDRAITVLILTMIMCFVSGSIAVRKLRSADPADIF
>Mature_385_residues
MNRKRIPLSWLQLTREKTRLAVALAGIAFADILMFMQIGFRDALYYSNVRLHTSLQGDIVLINKQSNAVLAMKPFSQRRL
YKSLELPSVQSVHPIYLDYSIWKNPYTGLTRSILVFGINPETNILNLAGVQENLDKLKLPDAVLFDRSSRPEYGPIAKNF
EQGQSISAEVRRRRINVVGLFTLGASFGADGNLVTSDVNFLRLFPLRRQGLIDIGLVRLKPGVNPNTAVQELRSYLPDDI
NVLTKQEFIDFERNYWASSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLSEYATLKAIGYTQKYLLGVILQEALLL
ACLGYLPGWVFAMVLYQTARQATLLPVFMSYDRAITVLILTMIMCFVSGSIAVRKLRSADPADIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43309; Mature: 43309

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKRIPLSWLQLTREKTRLAVALAGIAFADILMFMQIGFRDALYYSNVRLHTSLQGDIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCEEEEEECCCCEE
LINKQSNAVLAMKPFSQRRLYKSLELPSVQSVHPIYLDYSIWKNPYTGLTRSILVFGINP
EEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCC
ETNILNLAGVQENLDKLKLPDAVLFDRSSRPEYGPIAKNFEQGQSISAEVRRRRINVVGL
CCCEEEECCCHHHHHHHCCCCHHEECCCCCCCCCCCHHCHHCCCCHHHHHHHHHCCEEEE
FTLGASFGADGNLVTSDVNFLRLFPLRRQGLIDIGLVRLKPGVNPNTAVQELRSYLPDDI
EEECCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCH
NVLTKQEFIDFERNYWASSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLSEYATLK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGYTQKYLLGVILQEALLLACLGYLPGWVFAMVLYQTARQATLLPVFMSYDRAITVLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMIMCFVSGSIAVRKLRSADPADIF
HHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRKRIPLSWLQLTREKTRLAVALAGIAFADILMFMQIGFRDALYYSNVRLHTSLQGDIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEECCEEEEEECCCCEE
LINKQSNAVLAMKPFSQRRLYKSLELPSVQSVHPIYLDYSIWKNPYTGLTRSILVFGINP
EEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCC
ETNILNLAGVQENLDKLKLPDAVLFDRSSRPEYGPIAKNFEQGQSISAEVRRRRINVVGL
CCCEEEECCCHHHHHHHCCCCHHEECCCCCCCCCCCHHCHHCCCCHHHHHHHHHCCEEEE
FTLGASFGADGNLVTSDVNFLRLFPLRRQGLIDIGLVRLKPGVNPNTAVQELRSYLPDDI
EEECCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCH
NVLTKQEFIDFERNYWASSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLSEYATLK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGYTQKYLLGVILQEALLLACLGYLPGWVFAMVLYQTARQATLLPVFMSYDRAITVLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMIMCFVSGSIAVRKLRSADPADIF
HHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA