| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909771
Identifier: 75909771
GI number: 75909771
Start: 4440548
End: 4441630
Strand: Direct
Name: 75909771
Synonym: Ava_3566
Alternate gene names: NA
Gene position: 4440548-4441630 (Clockwise)
Preceding gene: 75909769
Following gene: 75909777
Centisome position: 69.76
GC content: 41.09
Gene sequence:
>1083_bases GTGAGTCTGGATTTGTCTACTCCATTGCAATTAATTGGGCGTTCAGTGGAGTTTCAGCGCGTTGTAGAAGTGCTGGCCCA GGATGGTGACTTGTTAATTACGGGAGTACCGGGTAGTGGTAGGCGTACTCTAGTGCGGTGGGGCGTGACAGAAGTGAGAG CGATCGCTCTAGATATTGACTGCATCCGCGCCACAGATGGAGAGCGATTTTTACAGTTACTCACAGAAGCAATTAACCAA AATTGGCAAGCAGAAAAAATCCAAAGTTGGTTAGATAAAAATGCCAAGGAATTTTTTACATTTCATCCAGAAACTAAACT TAAGCTATTACGTTCTCTCAGCCAAAAACAAATTTGGCAAGCCTTTGAACTATTGTTGGAATTGCCGCAAATTATGGCAG TAGATTTAAACAAACGTTTAGTCTTAATTCTGCAAAGTTTCCCCCACATTCGCTCTTGGGATCGTAACGGTTTATGGGAA ATATCATTCCGGCGGAAAATCAAAGAACACACTCATGTAAGTTATGTGCTGATTGCCACGATCGCCGAGACGGGAAATTA TTCAGACGAAAATAATTATCCTTTAGAAACCATCCAATTACCTCCCTTGAACCGAGATGTATTGGCAGTATGGGCGAGGG AAATATTACATGGTTCAAAACTCACATTTGATTCCCGTTCTAAAGCATTACAACTATTTTTAGATGCCGTACAAGGTCAT ATTGGCGATGCGATGGCAATAATTCGCCGTCTACAAACTTTATGTGTTCCTGATAGCTTAGTTACAGAAAATGATGTCCA GCAAGCCATTGAAGGATTACTCAAAGATTTATCAATGACCTATGAATCTTTATTGATGTTGCTACCAGCCAATCAGGTAC ATCTTTTGGAATGTTTAGCTTTAGACCCCACAGAAAAACCCCAAAGCAAAGACTATATTCAAAAACACGGTCTTTCTAGG GGTGGTAGTCTCCAAGGTGCGCTGACAGGGTTACATCACAAGGGTTTAATTTATGGTGCAGAACAAGGTTATTTATTAGC AATGCCATTGTTAGCTTTGTGGTTGCGCCAAAGATTGAGTTAG
Upstream 100 bases:
>100_bases CTCCGCTTCGGGGAGAGGTTTGGAGAGGGGTCTTTATTATCATTCATAACTTTTCAAACATCCTCTTAGAGTTAGGATTA AACCTGAAGGTGTAAAACTT
Downstream 100 bases:
>100_bases TGATTCCCAGATTAAGCTGATTGTAAACTCAAGGCCTCGAACTGTTGCCAACACAGATACAAAGCACGGGGTACATGAAA ACATCCCTTCCATTTACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQ NWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWE ISFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSR GGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS
Sequences:
>Translated_360_residues MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQ NWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWE ISFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSR GGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS >Mature_359_residues SLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQN WQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEI SFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGHI GDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSRG GSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40839; Mature: 40708
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDID CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCHHHHHHHEEEEH CIRATDGERFLQLLTEAINQNWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQ HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHH AFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEISFRRKIKEHTHVSYVLIAT HHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHCCCCCCCEEEHHHHHHHHHCCHHHHHEEE IAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLA HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LDPTEKPQSKDYIQKHGLSRGGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDID CCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCHHHHHHHEEEEH CIRATDGERFLQLLTEAINQNWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQ HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHH AFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEISFRRKIKEHTHVSYVLIAT HHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHCCCCCCCEEEHHHHHHHHHCCHHHHHEEE IAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLA HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LDPTEKPQSKDYIQKHGLSRGGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA