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The map label for this gene is tnsC [H]

Identifier: 75909694

GI number: 75909694

Start: 4327217

End: 4328887

Strand: Direct

Name: tnsC [H]

Synonym: Ava_3488

Alternate gene names: 75909694

Gene position: 4327217-4328887 (Clockwise)

Preceding gene: 75909693

Following gene: 75909695

Centisome position: 67.98

GC content: 33.87

Gene sequence:

>1671_bases
GTGGACAGAATTGAGAGTGAACTGGTTAAAATTCCTAATGGAGAACTAGCAGTTATTGCCAGATATATAGATCAAAAACT
GCCAGAATACAACACTAATCCATTAATTCAGGCATTACCTCCTATCCTATCAGCAGCAGAATTTATAGATAAAGTAGCCA
GAGAACCAAATTTTGATGAACAAGAGAGAGAGCTAGAACCACATTATAGATTTCATTGTATTGAGAGGTTATCTAGATAT
TTTGACCCTCAAAATAAAACTCTTGAATTACAAAAAGTTATTTGTACGCTTATCATGACAGGCTATCTGTCAAGGAACCT
TTTAAAACCTGAATATGCAAATCGCTCTAGGCAAATTTATAATGCAATAGGTAATGGAGGAGGTAAAAATTTAGAAAACT
ATGTTAATCTTCCTACATCTGCGTCCGGCTTAACTCTAATTGGCCCATCAGGTATTGGAAAGACTACAAATTTCAAAAAT
ATTCTTGAGCTTTATCCCCAAATAATTTTTCATCCTGATTATAGTGTTTACCAAATAGTTTGGCTGCGGGTAGATTGCCC
TAAAACTTTAAAGGGGTTATGTATAGATACTTTTGCAGGTATCGATAAATTGTTAGGAACTAATTTATTAAAGAAATTTA
ACCCAGCACGCACATCTGAAGATTATCTATTGGCTCAACTTGCACAAACAGCACACACTCATCATCTAGGAGTTTTGGTG
ATTGATGAAATACAAAATTTAGCAACTGCAAAAAGAAATAGAGACGAAATATTAAATTTTTTAGTAAAGCTCGATAATAC
TATTGGAATTCCAGTTATTCGTGTAGGTACGAATGAAGCCATTAGTTTTCTTCAAGGTAATCTTAGAAATGCTAGAAGAA
ATACTGGAGAAGGAAGTAGAATGTGGGATAGAATGGTAAATAATGATGAATGGTGTTACTTTTTAGAAGGAATATGGGAA
TACCAATGGACAAAAACACCTGTTCATTTCTCGGATGAAATAAAAGAAGTTTTTTATGATGAAAGCCAGGGAATTATTGA
TATTGCTATAAAACTTTACAAAATGGTTCAATGGAGAGCGATTTCAATAGGTGACCAAGAAATTATTACGGTTGATCTGA
TTCGTCAAGTAGCTAAAGAAGGATTGTATTTAGTAAAGCCAATGCTAGATGCAATTAGGTTAGGGGACAGAGAGTGGATG
ATTAAATATAAGGATATTGCTCCTCTCGATATTACGGAATATCACAATAGATGTGTATCTGAGATTGATGCTAAAGATTT
GACAGAGATTAAGAGATTAGCTAAAAAGCAGCAGAATCAGCAGAAAGTATCTCCGAAGCTCAATTATGTAATTAGTGAGC
TGTTGAAATTGGAAGTAGAATCTGGTAAAGCAAAGGAATGTGCAGAACAAATTGTTTATAGTCATGAAGATCCAGACATT
CCAATTCCATCTTTAGTTAATAAGGCATATGCTCTTGCTTTGCAAGGATGTCAAGTAAATGAGAGTCTTGCTAAAACAAG
TACCAGGAAAGCTAAATTAAAGACAAAGTACCAAGAGAATGATATTCGGCGAATTGTCGAGAATGCCAAGAAAGACAAAA
AATCTGCATACGAGGATTTGAAATTAGCAGGTATAATCAAAAATCCAGTTGAAGATTTTATCAATATTTAG

Upstream 100 bases:

>100_bases
TTTCAGGTTGCAGAGAGTACAGCAGAAACCTCCGAACAGCCAGAATCACTACAGCCAAACCATCTGAATCTTCTTAAGAA
AAAGCGACAGGAGCGAAAAC

Downstream 100 bases:

>100_bases
CTTCTAAATGCTTAGTTTTTTCCCAACTCTGTATCCCGATGAACTTTTATATAGCACTTTAGCTAGATACCATATTCGGA
GTGGAAATAAAAGTTTCAAG

Product: Tn7-like protein transposition protein C

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MDRIESELVKIPNGELAVIARYIDQKLPEYNTNPLIQALPPILSAAEFIDKVAREPNFDEQERELEPHYRFHCIERLSRY
FDPQNKTLELQKVICTLIMTGYLSRNLLKPEYANRSRQIYNAIGNGGGKNLENYVNLPTSASGLTLIGPSGIGKTTNFKN
ILELYPQIIFHPDYSVYQIVWLRVDCPKTLKGLCIDTFAGIDKLLGTNLLKKFNPARTSEDYLLAQLAQTAHTHHLGVLV
IDEIQNLATAKRNRDEILNFLVKLDNTIGIPVIRVGTNEAISFLQGNLRNARRNTGEGSRMWDRMVNNDEWCYFLEGIWE
YQWTKTPVHFSDEIKEVFYDESQGIIDIAIKLYKMVQWRAISIGDQEIITVDLIRQVAKEGLYLVKPMLDAIRLGDREWM
IKYKDIAPLDITEYHNRCVSEIDAKDLTEIKRLAKKQQNQQKVSPKLNYVISELLKLEVESGKAKECAEQIVYSHEDPDI
PIPSLVNKAYALALQGCQVNESLAKTSTRKAKLKTKYQENDIRRIVENAKKDKKSAYEDLKLAGIIKNPVEDFINI

Sequences:

>Translated_556_residues
MDRIESELVKIPNGELAVIARYIDQKLPEYNTNPLIQALPPILSAAEFIDKVAREPNFDEQERELEPHYRFHCIERLSRY
FDPQNKTLELQKVICTLIMTGYLSRNLLKPEYANRSRQIYNAIGNGGGKNLENYVNLPTSASGLTLIGPSGIGKTTNFKN
ILELYPQIIFHPDYSVYQIVWLRVDCPKTLKGLCIDTFAGIDKLLGTNLLKKFNPARTSEDYLLAQLAQTAHTHHLGVLV
IDEIQNLATAKRNRDEILNFLVKLDNTIGIPVIRVGTNEAISFLQGNLRNARRNTGEGSRMWDRMVNNDEWCYFLEGIWE
YQWTKTPVHFSDEIKEVFYDESQGIIDIAIKLYKMVQWRAISIGDQEIITVDLIRQVAKEGLYLVKPMLDAIRLGDREWM
IKYKDIAPLDITEYHNRCVSEIDAKDLTEIKRLAKKQQNQQKVSPKLNYVISELLKLEVESGKAKECAEQIVYSHEDPDI
PIPSLVNKAYALALQGCQVNESLAKTSTRKAKLKTKYQENDIRRIVENAKKDKKSAYEDLKLAGIIKNPVEDFINI
>Mature_556_residues
MDRIESELVKIPNGELAVIARYIDQKLPEYNTNPLIQALPPILSAAEFIDKVAREPNFDEQERELEPHYRFHCIERLSRY
FDPQNKTLELQKVICTLIMTGYLSRNLLKPEYANRSRQIYNAIGNGGGKNLENYVNLPTSASGLTLIGPSGIGKTTNFKN
ILELYPQIIFHPDYSVYQIVWLRVDCPKTLKGLCIDTFAGIDKLLGTNLLKKFNPARTSEDYLLAQLAQTAHTHHLGVLV
IDEIQNLATAKRNRDEILNFLVKLDNTIGIPVIRVGTNEAISFLQGNLRNARRNTGEGSRMWDRMVNNDEWCYFLEGIWE
YQWTKTPVHFSDEIKEVFYDESQGIIDIAIKLYKMVQWRAISIGDQEIITVDLIRQVAKEGLYLVKPMLDAIRLGDREWM
IKYKDIAPLDITEYHNRCVSEIDAKDLTEIKRLAKKQQNQQKVSPKLNYVISELLKLEVESGKAKECAEQIVYSHEDPDI
PIPSLVNKAYALALQGCQVNESLAKTSTRKAKLKTKYQENDIRRIVENAKKDKKSAYEDLKLAGIIKNPVEDFINI

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 63745; Mature: 63745

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIESELVKIPNGELAVIARYIDQKLPEYNTNPLIQALPPILSAAEFIDKVAREPNFDE
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
QERELEPHYRFHCIERLSRYFDPQNKTLELQKVICTLIMTGYLSRNLLKPEYANRSRQIY
HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
NAIGNGGGKNLENYVNLPTSASGLTLIGPSGIGKTTNFKNILELYPQIIFHPDYSVYQIV
HHHCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEE
WLRVDCPKTLKGLCIDTFAGIDKLLGTNLLKKFNPARTSEDYLLAQLAQTAHTHHLGVLV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEE
IDEIQNLATAKRNRDEILNFLVKLDNTIGIPVIRVGTNEAISFLQGNLRNARRNTGEGSR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHH
MWDRMVNNDEWCYFLEGIWEYQWTKTPVHFSDEIKEVFYDESQGIIDIAIKLYKMVQWRA
HHHHHCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE
ISIGDQEIITVDLIRQVAKEGLYLVKPMLDAIRLGDREWMIKYKDIAPLDITEYHNRCVS
EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHH
EIDAKDLTEIKRLAKKQQNQQKVSPKLNYVISELLKLEVESGKAKECAEQIVYSHEDPDI
HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PIPSLVNKAYALALQGCQVNESLAKTSTRKAKLKTKYQENDIRRIVENAKKDKKSAYEDL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAGIIKNPVEDFINI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRIESELVKIPNGELAVIARYIDQKLPEYNTNPLIQALPPILSAAEFIDKVAREPNFDE
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
QERELEPHYRFHCIERLSRYFDPQNKTLELQKVICTLIMTGYLSRNLLKPEYANRSRQIY
HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
NAIGNGGGKNLENYVNLPTSASGLTLIGPSGIGKTTNFKNILELYPQIIFHPDYSVYQIV
HHHCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEE
WLRVDCPKTLKGLCIDTFAGIDKLLGTNLLKKFNPARTSEDYLLAQLAQTAHTHHLGVLV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEE
IDEIQNLATAKRNRDEILNFLVKLDNTIGIPVIRVGTNEAISFLQGNLRNARRNTGEGSR
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHH
MWDRMVNNDEWCYFLEGIWEYQWTKTPVHFSDEIKEVFYDESQGIIDIAIKLYKMVQWRA
HHHHHCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE
ISIGDQEIITVDLIRQVAKEGLYLVKPMLDAIRLGDREWMIKYKDIAPLDITEYHNRCVS
EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHH
EIDAKDLTEIKRLAKKQQNQQKVSPKLNYVISELLKLEVESGKAKECAEQIVYSHEDPDI
HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PIPSLVNKAYALALQGCQVNESLAKTSTRKAKLKTKYQENDIRRIVENAKKDKKSAYEDL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAGIIKNPVEDFINI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]