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The map label for this gene is tnsD [H]

Identifier: 75909695

GI number: 75909695

Start: 4328895

End: 4329845

Strand: Direct

Name: tnsD [H]

Synonym: Ava_3489

Alternate gene names: 75909695

Gene position: 4328895-4329845 (Clockwise)

Preceding gene: 75909694

Following gene: 75909696

Centisome position: 68.0

GC content: 33.75

Gene sequence:

>951_bases
ATGCTTAGTTTTTTCCCAACTCTGTATCCCGATGAACTTTTATATAGCACTTTAGCTAGATACCATATTCGGAGTGGAAA
TAAAAGTTTCAAGCAAACTGACTTAGAGCTATTCGGTTACAGTTCCCAACAAATATGCAAAATTACCTTAACTAATAATT
TAAATTATTTAGTGAAAAACTTACCTTTACGCTCCCAGCAAAAAGTTGAGAATTTACTACAAAATCATACTTTATATTCC
TTTTATGCAACTTTATTAATGCCGCAGGAGGCTTGGCTGCTGAAAAACTCAATGAGTAATAAATTCAGTGGGTCTATACT
AGATTTTGCTAAAGTGGCTAATAATTCTAGTGATGATTCAAAAAAATTTTTAAAATTTTGCCCTGAATGTTTAGAGAAAG
ATACCCAAAAGTATGGTGAACCTTACTGGCATAGAATACATCAAGTCCCTGGCATTTTAGTTTGTCCAATTCATCGTGTT
GTTTTACACAATAGCTGTATAGAAGTTGAATCGAAAGGCATACATTATCATGCTGCCAGCATAGATAATTGTTTATTAGC
AAATAATGTGAAAAAATTGACAAATAAAACTGTAGAAACACTTTCAATACTGGCACATGATATTAATTGGCTAATTCATA
GCAGTTTTGCCTTTCAAGGTTTGGCTTGGCTTCGCGCTCAGTACCAGCGTTACTTATTGGATAAAGGACTGCTAAAAACC
TTTGCTGGTGGCAAGTTTAAGTTTAATGATTGTGGTTTTGCCCAGCTTATATTTGAGTTTTATGGTCAAGAATCCTTAGA
AGCCCTCAATCCAAAGCTGACCCAAAATCAAGGTAAATATTTTTCTCACTGCTTGTTTGGATGCGACTTAAACCCAGCAA
TTGACCGCATAACTCATATCTTAATGATAAAATTTTTAGCAAATTCTATAGAAGAGTTCTTTCAGTCATAA

Upstream 100 bases:

>100_bases
GAGAATGCCAAGAAAGACAAAAAATCTGCATACGAGGATTTGAAATTAGCAGGTATAATCAAAAATCCAGTTGAAGATTT
TATCAATATTTAGCTTCTAA

Downstream 100 bases:

>100_bases
TCTTCATATACAAAATTTAACTAAATTAATAAAAAGCAATAATAACTAATCAAAATTATTTTTATTGATTATTATTTTAA
GTATTTTCAGATTAGTGAAT

Product: Tn7-like protein transposition protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLSFFPTLYPDELLYSTLARYHIRSGNKSFKQTDLELFGYSSQQICKITLTNNLNYLVKNLPLRSQQKVENLLQNHTLYS
FYATLLMPQEAWLLKNSMSNKFSGSILDFAKVANNSSDDSKKFLKFCPECLEKDTQKYGEPYWHRIHQVPGILVCPIHRV
VLHNSCIEVESKGIHYHAASIDNCLLANNVKKLTNKTVETLSILAHDINWLIHSSFAFQGLAWLRAQYQRYLLDKGLLKT
FAGGKFKFNDCGFAQLIFEFYGQESLEALNPKLTQNQGKYFSHCLFGCDLNPAIDRITHILMIKFLANSIEEFFQS

Sequences:

>Translated_316_residues
MLSFFPTLYPDELLYSTLARYHIRSGNKSFKQTDLELFGYSSQQICKITLTNNLNYLVKNLPLRSQQKVENLLQNHTLYS
FYATLLMPQEAWLLKNSMSNKFSGSILDFAKVANNSSDDSKKFLKFCPECLEKDTQKYGEPYWHRIHQVPGILVCPIHRV
VLHNSCIEVESKGIHYHAASIDNCLLANNVKKLTNKTVETLSILAHDINWLIHSSFAFQGLAWLRAQYQRYLLDKGLLKT
FAGGKFKFNDCGFAQLIFEFYGQESLEALNPKLTQNQGKYFSHCLFGCDLNPAIDRITHILMIKFLANSIEEFFQS
>Mature_316_residues
MLSFFPTLYPDELLYSTLARYHIRSGNKSFKQTDLELFGYSSQQICKITLTNNLNYLVKNLPLRSQQKVENLLQNHTLYS
FYATLLMPQEAWLLKNSMSNKFSGSILDFAKVANNSSDDSKKFLKFCPECLEKDTQKYGEPYWHRIHQVPGILVCPIHRV
VLHNSCIEVESKGIHYHAASIDNCLLANNVKKLTNKTVETLSILAHDINWLIHSSFAFQGLAWLRAQYQRYLLDKGLLKT
FAGGKFKFNDCGFAQLIFEFYGQESLEALNPKLTQNQGKYFSHCLFGCDLNPAIDRITHILMIKFLANSIEEFFQS

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36407; Mature: 36407

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFFPTLYPDELLYSTLARYHIRSGNKSFKQTDLELFGYSSQQICKITLTNNLNYLVKN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHC
LPLRSQQKVENLLQNHTLYSFYATLLMPQEAWLLKNSMSNKFSGSILDFAKVANNSSDDS
CCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHH
KKFLKFCPECLEKDTQKYGEPYWHRIHQVPGILVCPIHRVVLHNSCIEVESKGIHYHAAS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECC
IDNCLLANNVKKLTNKTVETLSILAHDINWLIHSSFAFQGLAWLRAQYQRYLLDKGLLKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGKFKFNDCGFAQLIFEFYGQESLEALNPKLTQNQGKYFSHCLFGCDLNPAIDRITHI
HCCCCEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
LMIKFLANSIEEFFQS
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSFFPTLYPDELLYSTLARYHIRSGNKSFKQTDLELFGYSSQQICKITLTNNLNYLVKN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHC
LPLRSQQKVENLLQNHTLYSFYATLLMPQEAWLLKNSMSNKFSGSILDFAKVANNSSDDS
CCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHH
KKFLKFCPECLEKDTQKYGEPYWHRIHQVPGILVCPIHRVVLHNSCIEVESKGIHYHAAS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECC
IDNCLLANNVKKLTNKTVETLSILAHDINWLIHSSFAFQGLAWLRAQYQRYLLDKGLLKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGKFKFNDCGFAQLIFEFYGQESLEALNPKLTQNQGKYFSHCLFGCDLNPAIDRITHI
HCCCCEEECCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH
LMIKFLANSIEEFFQS
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2156235; 1655576 [H]