| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909412
Identifier: 75909412
GI number: 75909412
Start: 3983821
End: 3985035
Strand: Direct
Name: 75909412
Synonym: Ava_3205
Alternate gene names: NA
Gene position: 3983821-3985035 (Clockwise)
Preceding gene: 75909411
Following gene: 75909413
Centisome position: 62.58
GC content: 43.87
Gene sequence:
>1215_bases ATGAATTCTCATTCAGCGCTACAAACAGCCATCACCCATCGCATTGCTAACAGCCCCGAAGCGCGAATTACTTTTGCAGA ATATATGGACATGGCGCTTTACCACCCTGAATACGGTTATTATTCCAGCAATACCGTCAAAATCGGGTTTAAAGGTGGCG ATTTTTTCACTTCAGTCAATTTAGGTGCTGACCTTGGTGATTTACTAGCAGAACAATTTGTGCAGATGTGGGAGATTTTA GGAAAACCCACACCCTTTTATTTGGTGGAAATGGGAGCAGGGCAAGGACTGTTAGCTTTACATATCCTGAAATATATACA GGTAAAATATCCCAACTTATTTACAGCCTTGCAATATCTGATTGTAGAAAAATCCCCAGGTTTAAAGCAAGAACAACAGG AACGCTTACAAGGGTTTTCTGTGCGCTGGTGCAGTTGGGAGGAAATATCACCTAACTCGATTACAGGCTGTTTTTTTTCC AATGAATTAGTAGATGCACTACCAGTACATCAGTTCATTTTAGAGGGAGGGGAACTGAGGGAAATTTATCTAACTGTCCA GGGAGAGAAGGAAGCACAAGAAGCAAAAAATCTTTCCCCATCCCCTAATTACGAATTAACTGAAGTCGCAGCAGCCCCAT CTACCCCCAGACTCGCAGAATATTTTGACTTAGTAGGCATTAATTTGGCGCAAGGCGGTTATGAAGATGGCTATCGCAGT GAAATTAATTTAGCGGCTCTTGATTGGTTGAGTATAGTAGCAGACCGCTTGCAAAGAGGGTATGTGATAACAATTGATTA TGGCTATCCTGCCAGCCGTTACTATAACCCCAGGCGATCGCAAGGAACCTTACAGTGCTACTATCAACATCGTCATCACA ACAACCCCTATATCAATATTGGGCAACAAGATATCACCGCCCATGTTGACTTTACCGCCTTGGAACGATGGGGCGATCGC TGTGGCCTAGAAAAACTCGGTTTTACCCAGCAAGCTCTATTTTTAATGGCTCTGGGTTTAGGCGATCGCATTGCAGCCCT CTCCTATCAACAAATACCAGTTTCTGAGTTACTCCACAGGCGACAAGCACTACACCAGTTAATCGATCCCACAGGACTTG GGGGCTTTGGAGTTCTAATTCAAAGCAAGGGACTGACAAAAGAGGAAGCTTCTCAAGCACTCAAAGGATTATCTGTGCCA GAACTGGGTAAGTAG
Upstream 100 bases:
>100_bases AACTTATGCAGACAGGAGCGAAAACCCTCGCAACATCGCCTTATATTTTGGAAAGTTGAATTACAAAATTTCCTACTCCC GGCTTTAATTTAACTTGTCT
Downstream 100 bases:
>100_bases GGGGTGCAGACAAATGTACAGACGCGATTCATCGCATTCCTAAAATTGTACAGACGCGATTAATCGCGTCTCTGACTAAT AATTAAAACTCTATTTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNSHSALQTAITHRIANSPEARITFAEYMDMALYHPEYGYYSSNTVKIGFKGGDFFTSVNLGADLGDLLAEQFVQMWEIL GKPTPFYLVEMGAGQGLLALHILKYIQVKYPNLFTALQYLIVEKSPGLKQEQQERLQGFSVRWCSWEEISPNSITGCFFS NELVDALPVHQFILEGGELREIYLTVQGEKEAQEAKNLSPSPNYELTEVAAAPSTPRLAEYFDLVGINLAQGGYEDGYRS EINLAALDWLSIVADRLQRGYVITIDYGYPASRYYNPRRSQGTLQCYYQHRHHNNPYINIGQQDITAHVDFTALERWGDR CGLEKLGFTQQALFLMALGLGDRIAALSYQQIPVSELLHRRQALHQLIDPTGLGGFGVLIQSKGLTKEEASQALKGLSVP ELGK
Sequences:
>Translated_404_residues MNSHSALQTAITHRIANSPEARITFAEYMDMALYHPEYGYYSSNTVKIGFKGGDFFTSVNLGADLGDLLAEQFVQMWEIL GKPTPFYLVEMGAGQGLLALHILKYIQVKYPNLFTALQYLIVEKSPGLKQEQQERLQGFSVRWCSWEEISPNSITGCFFS NELVDALPVHQFILEGGELREIYLTVQGEKEAQEAKNLSPSPNYELTEVAAAPSTPRLAEYFDLVGINLAQGGYEDGYRS EINLAALDWLSIVADRLQRGYVITIDYGYPASRYYNPRRSQGTLQCYYQHRHHNNPYINIGQQDITAHVDFTALERWGDR CGLEKLGFTQQALFLMALGLGDRIAALSYQQIPVSELLHRRQALHQLIDPTGLGGFGVLIQSKGLTKEEASQALKGLSVP ELGK >Mature_404_residues MNSHSALQTAITHRIANSPEARITFAEYMDMALYHPEYGYYSSNTVKIGFKGGDFFTSVNLGADLGDLLAEQFVQMWEIL GKPTPFYLVEMGAGQGLLALHILKYIQVKYPNLFTALQYLIVEKSPGLKQEQQERLQGFSVRWCSWEEISPNSITGCFFS NELVDALPVHQFILEGGELREIYLTVQGEKEAQEAKNLSPSPNYELTEVAAAPSTPRLAEYFDLVGINLAQGGYEDGYRS EINLAALDWLSIVADRLQRGYVITIDYGYPASRYYNPRRSQGTLQCYYQHRHHNNPYINIGQQDITAHVDFTALERWGDR CGLEKLGFTQQALFLMALGLGDRIAALSYQQIPVSELLHRRQALHQLIDPTGLGGFGVLIQSKGLTKEEASQALKGLSVP ELGK
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24645885, Length=399, Percent_Identity=27.0676691729323, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45286; Mature: 45286
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSHSALQTAITHRIANSPEARITFAEYMDMALYHPEYGYYSSNTVKIGFKGGDFFTSVN CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEECCCEEEEEECCCCEEEEEE LGADLGDLLAEQFVQMWEILGKPTPFYLVEMGAGQGLLALHILKYIQVKYPNLFTALQYL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHH IVEKSPGLKQEQQERLQGFSVRWCSWEEISPNSITGCFFSNELVDALPVHQFILEGGELR HEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE EIYLTVQGEKEAQEAKNLSPSPNYELTEVAAAPSTPRLAEYFDLVGINLAQGGYEDGYRS EEEEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEECCCCCCCCCCC EINLAALDWLSIVADRLQRGYVITIDYGYPASRYYNPRRSQGTLQCYYQHRHHNNPYINI CCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCCCCCEEEEEEHHCCCCCEEEE GQQDITAHVDFTALERWGDRCGLEKLGFTQQALFLMALGLGDRIAALSYQQIPVSELLHR CCCCEEEEECHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHCEECCCCHHHHHHH RQALHQLIDPTGLGGFGVLIQSKGLTKEEASQALKGLSVPELGK HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNSHSALQTAITHRIANSPEARITFAEYMDMALYHPEYGYYSSNTVKIGFKGGDFFTSVN CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEECCCEEEEEECCCCEEEEEE LGADLGDLLAEQFVQMWEILGKPTPFYLVEMGAGQGLLALHILKYIQVKYPNLFTALQYL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHH IVEKSPGLKQEQQERLQGFSVRWCSWEEISPNSITGCFFSNELVDALPVHQFILEGGELR HEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE EIYLTVQGEKEAQEAKNLSPSPNYELTEVAAAPSTPRLAEYFDLVGINLAQGGYEDGYRS EEEEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEECCCCCCCCCCC EINLAALDWLSIVADRLQRGYVITIDYGYPASRYYNPRRSQGTLQCYYQHRHHNNPYINI CCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCCCCCCCEEEEEEHHCCCCCEEEE GQQDITAHVDFTALERWGDRCGLEKLGFTQQALFLMALGLGDRIAALSYQQIPVSELLHR CCCCEEEEECHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHCEECCCCHHHHHHH RQALHQLIDPTGLGGFGVLIQSKGLTKEEASQALKGLSVPELGK HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA