| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75909007
Identifier: 75909007
GI number: 75909007
Start: 3449266
End: 3449835
Strand: Direct
Name: 75909007
Synonym: Ava_2795
Alternate gene names: NA
Gene position: 3449266-3449835 (Clockwise)
Preceding gene: 75909006
Following gene: 75909008
Centisome position: 54.18
GC content: 43.16
Gene sequence:
>570_bases ATGGCGCAACTTAACAATTCAAAATTCAATATGAAAGAACTTAATCCCAGCTTGCCTTTAAAGCAAATTCAGTCGGAGAT GACAGCACTCCAGTCGCAAATTCAGGTGCTTGAGCAAGAACGTGCTGCACTCACTATTAATAATGATGTAATGACTCATG AGGATGATTCGCCTTTCGCCATTGTGGAAGCTTATCGTCGCCAAGCTAGGGAAAATGCCCAACTATTTGCGGAAATCAAA GGCATAGAAGATGCGATCGCCGCTTTAGACACACAACTACAACACAAAAAAGCTGAATTAGCGCGTTTGCCAAGGAGACA GCAACAAATTAACCAAGAGCAACAATTAGAAGCAGCGAAAGAAGTGGCTCAAGTCCATGCGGAACGAATCAATGAAATAG CCCAAGAACTGGCAGCAGAAATCCGTTTGCTCAAAGCCTGCGCTGATCAACTCAGTCCTTTATATTGGCAGGTTTATTAC AAACCCTTTATTACCGGGTTCAAAACCATCTCAGTTCCCTATGTCCGTTCAGATGGGGCAGTTTGGACAATTGTCAATCG CATTGTTTAG
Upstream 100 bases:
>100_bases GCGGATGTATCTCATGCGGCAGCTGTTGCGGCGGCAATGTCCACAGCTTGGCGAGAGGCGGGAATTAAGGCTGTAGTGCG ATCGCTTGCTCTCGATACTC
Downstream 100 bases:
>100_bases GGAATCTTGAAAAATTACTCCCCTAGAATAGAGGTAATACAAAGATTTGTAACGGTGGTTGGAGCCACCGTTTTTTATTG ACGTTACAAAAGTTTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAQLNNSKFNMKELNPSLPLKQIQSEMTALQSQIQVLEQERAALTINNDVMTHEDDSPFAIVEAYRRQARENAQLFAEIK GIEDAIAALDTQLQHKKAELARLPRRQQQINQEQQLEAAKEVAQVHAERINEIAQELAAEIRLLKACADQLSPLYWQVYY KPFITGFKTISVPYVRSDGAVWTIVNRIV
Sequences:
>Translated_189_residues MAQLNNSKFNMKELNPSLPLKQIQSEMTALQSQIQVLEQERAALTINNDVMTHEDDSPFAIVEAYRRQARENAQLFAEIK GIEDAIAALDTQLQHKKAELARLPRRQQQINQEQQLEAAKEVAQVHAERINEIAQELAAEIRLLKACADQLSPLYWQVYY KPFITGFKTISVPYVRSDGAVWTIVNRIV >Mature_188_residues AQLNNSKFNMKELNPSLPLKQIQSEMTALQSQIQVLEQERAALTINNDVMTHEDDSPFAIVEAYRRQARENAQLFAEIKG IEDAIAALDTQLQHKKAELARLPRRQQQINQEQQLEAAKEVAQVHAERINEIAQELAAEIRLLKACADQLSPLYWQVYYK PFITGFKTISVPYVRSDGAVWTIVNRIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21600; Mature: 21469
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLNNSKFNMKELNPSLPLKQIQSEMTALQSQIQVLEQERAALTINNDVMTHEDDSPFA CCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCHH IVEAYRRQARENAQLFAEIKGIEDAIAALDTQLQHKKAELARLPRRQQQINQEQQLEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH EVAQVHAERINEIAQELAAEIRLLKACADQLSPLYWQVYYKPFITGFKTISVPYVRSDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHEECCEEECCCC VWTIVNRIV HHHHHHHCC >Mature Secondary Structure AQLNNSKFNMKELNPSLPLKQIQSEMTALQSQIQVLEQERAALTINNDVMTHEDDSPFA CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCHH IVEAYRRQARENAQLFAEIKGIEDAIAALDTQLQHKKAELARLPRRQQQINQEQQLEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH EVAQVHAERINEIAQELAAEIRLLKACADQLSPLYWQVYYKPFITGFKTISVPYVRSDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHEECCEEECCCC VWTIVNRIV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA