Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908965

Identifier: 75908965

GI number: 75908965

Start: 3393769

End: 3393879

Strand: Direct

Name: 75908965

Synonym: Ava_2753

Alternate gene names: NA

Gene position: 3393769-3393879 (Clockwise)

Preceding gene: 75908964

Following gene: 75908967

Centisome position: 53.31

GC content: 40.54

Gene sequence:

>111_bases
TTGAGTCGATTTCGGCGGTTGAGTAAAGATTATGAAGTCTATTCCGAAGTCAGTGAAGCCATGATTTATGGTTCTTTGCT
TCGTCTCATGGTTAAGCGATTAGCTGCTTAA

Upstream 100 bases:

>100_bases
GTCTGTGGCGAGCAGGTACAAGTGGAAATTATTGCACGAACCGCCAACACTTTTGAGCAATTGCCTAAGCGATGAATTGT
AGAGCGCACTTTTTGGATGG

Downstream 100 bases:

>100_bases
TATTTACTTTACGAATCAGATATAACAAAGTAAAAAATTATTTTCCCTAATTAGCCTCTAAGCGTAACACCAGCATTGCC
ATTCGGGAATTACAACGTAA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 35

Protein sequence:

>36_residues
MSRFRRLSKDYEVYSEVSEAMIYGSLLRLMVKRLAA

Sequences:

>Translated_36_residues
MSRFRRLSKDYEVYSEVSEAMIYGSLLRLMVKRLAA
>Mature_35_residues
SRFRRLSKDYEVYSEVSEAMIYGSLLRLMVKRLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4270; Mature: 4139

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRRLSKDYEVYSEVSEAMIYGSLLRLMVKRLAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRFRRLSKDYEVYSEVSEAMIYGSLLRLMVKRLAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA