| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908967
Identifier: 75908967
GI number: 75908967
Start: 3395450
End: 3396022
Strand: Direct
Name: 75908967
Synonym: Ava_2755
Alternate gene names: NA
Gene position: 3395450-3396022 (Clockwise)
Preceding gene: 75908965
Following gene: 75908968
Centisome position: 53.34
GC content: 43.28
Gene sequence:
>573_bases ATGAGCATTATTATTTGCCCTGGAATCCATGACTCAGATTTAACTGAAAGCTTCGTGTCAGGGTGCTTGGGTGCATTCTC TGGTAGCTCAATTAGTCAAAAGCCAGTAGAGATACTTGTTGTTCCCGTTGCAGGGGTTTTGACTTTATCATCACTTCATA TTTTGCAGTTTTTACACGATCGCTTGGGGAATAAGCTAAAATCGCCAGTTATATTCATCAGCTTCAGTGCTGGCGTAGTA GGAGCGATCACTGCTGCTTGGCAATGGCAAAATTGGGGGGGTCATGTCAAAGCATTTATTGCCATAGATGGGTGGGGTGT ACCACTGTGGGGAAATTTTCCCATTCATCGGCTCAGTCACGATTATTTTACTCATTGGAGTTCATTGTTATTAGGAAGTG GGCAAACTAATTTTTACGCAGAACCACCCGTTGAACATTTAACCATGTGGCGATCGCCCCAAACAGTACAAGGCTGGCGC TCTGATTCATCAGTAGAGAACGCTACCTCAAAAATCCGTCTAACTGCGTCCGAGTTTTTACACTCATTGTTAAGAAACTA TGAAGCAAAATAG
Upstream 100 bases:
>100_bases AATATTTAACACTATATGCTGTGAGGAAGAAATGTTGACTGTTGACCGTTGACTGTTGACTAATGACCAATGACCAATGA CAAATAACTATAATTTATAA
Downstream 100 bases:
>100_bases TCCGGAAAATAGTCCAAGTATACAGGAGGGAAATATTGAGTGATGAGAAAATAAGGGATGAGAAAAGAAGCAAGGGAGTA GAGAACAGGCTTCCGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSIIICPGIHDSDLTESFVSGCLGAFSGSSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVV GAITAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWR SDSSVENATSKIRLTASEFLHSLLRNYEAK
Sequences:
>Translated_190_residues MSIIICPGIHDSDLTESFVSGCLGAFSGSSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVV GAITAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWR SDSSVENATSKIRLTASEFLHSLLRNYEAK >Mature_189_residues SIIICPGIHDSDLTESFVSGCLGAFSGSSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVVG AITAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWRS DSSVENATSKIRLTASEFLHSLLRNYEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20929; Mature: 20798
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIICPGIHDSDLTESFVSGCLGAFSGSSISQKPVEILVVPVAGVLTLSSLHILQFLHD CEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH RLGNKLKSPVIFISFSAGVVGAITAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSH HHHHHHCCCEEEEEECCCHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHCH DYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWRSDSSVENATSKIRLTASEFL HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHEEEEEHHHHH HSLLRNYEAK HHHHHHCCCC >Mature Secondary Structure SIIICPGIHDSDLTESFVSGCLGAFSGSSISQKPVEILVVPVAGVLTLSSLHILQFLHD EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHH RLGNKLKSPVIFISFSAGVVGAITAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSH HHHHHHCCCEEEEEECCCHHHHHHHHEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHCH DYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWRSDSSVENATSKIRLTASEFL HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHEEEEEHHHHH HSLLRNYEAK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA