| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908747
Identifier: 75908747
GI number: 75908747
Start: 3133398
End: 3134093
Strand: Direct
Name: 75908747
Synonym: Ava_2533
Alternate gene names: NA
Gene position: 3133398-3134093 (Clockwise)
Preceding gene: 75908743
Following gene: 75908748
Centisome position: 49.22
GC content: 42.53
Gene sequence:
>696_bases ATGCAGCAGGTTGCAGCCGATTTAGAAATCGATTTCAAGAGCGAAAAATATAAAGATGCCTATAGTCGCATAAATGCGAT CGTGATTGAAGGGGAACAAGAAGCATATGAGAATTACATTCAACTATCCCAACTGCTGCCAGACGATAAAGAAGACCTAA TTCGCCTCTCGAAAATGGAAAGTCGCCACAAAAAAGGATTTGAAGCTTGTGGACGGAACCTGCAAGTATCCCCAGACATA GAGTTCGCTAAAGAATTCTTTGCCGGGCTACACGGTAATTTCCAAAAAGCGGCAGCTGAAGGTAAAGTTGTCACTTGCCT ATTGATTCAATCCCTGATTATTGAATGTTTTGCGATCGCCGCATACAATATCTACATCCCCGTGGCTGACGATTTCGCCC GTAAAATCACTGAGGGTGTAGTTAAAGATGAATACAGTCACCTCAACTTCGGCGAAGTTTGGTTACAGAAAAATTTCGCT CAATCAAAAGCAGAACTAGAAGAAGCTAATCGTCATAATCTTCCCATAGTCTGGAAAATGCTCAATCAAGTTGCCGATGA TGCGGCAGTCTTAGCTATGGAAAAAGAAGCCCTAGTGGAAGATTTTATGATTCAGTACGGCGAAGCACTAAGTAATATTG GCTTCACAACCAGAGATATTATGCGGATGTCAGCCTACGGACTCACAGCAGCTTAA
Upstream 100 bases:
>100_bases TTGTTAAGTAAAATTAAACCACAGTGAGCATTACCTTAAATTCATAGGGTAAATTAAAGTCTGGTATCAAATAATTCAGG TTTACAGGAGTAAACATATC
Downstream 100 bases:
>100_bases ATAGTTCTGATTCCTGATTAAAGTAAGGCGGCCAGTTATCTATTTCAGACTGGTGATGGGTAATAGGTAATGGATAAAAA TTTATTCCCAATTATCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MQQVAADLEIDFKSEKYKDAYSRINAIVIEGEQEAYENYIQLSQLLPDDKEDLIRLSKMESRHKKGFEACGRNLQVSPDI EFAKEFFAGLHGNFQKAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYSHLNFGEVWLQKNFA QSKAELEEANRHNLPIVWKMLNQVADDAAVLAMEKEALVEDFMIQYGEALSNIGFTTRDIMRMSAYGLTAA
Sequences:
>Translated_231_residues MQQVAADLEIDFKSEKYKDAYSRINAIVIEGEQEAYENYIQLSQLLPDDKEDLIRLSKMESRHKKGFEACGRNLQVSPDI EFAKEFFAGLHGNFQKAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYSHLNFGEVWLQKNFA QSKAELEEANRHNLPIVWKMLNQVADDAAVLAMEKEALVEDFMIQYGEALSNIGFTTRDIMRMSAYGLTAA >Mature_231_residues MQQVAADLEIDFKSEKYKDAYSRINAIVIEGEQEAYENYIQLSQLLPDDKEDLIRLSKMESRHKKGFEACGRNLQVSPDI EFAKEFFAGLHGNFQKAAAEGKVVTCLLIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYSHLNFGEVWLQKNFA QSKAELEEANRHNLPIVWKMLNQVADDAAVLAMEKEALVEDFMIQYGEALSNIGFTTRDIMRMSAYGLTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26134; Mature: 26134
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVAADLEIDFKSEKYKDAYSRINAIVIEGEQEAYENYIQLSQLLPDDKEDLIRLSKME CCCCCCCCEECCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRHKKGFEACGRNLQVSPDIEFAKEFFAGLHGNFQKAAAEGKVVTCLLIQSLIIECFAIA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH AYNIYIPVADDFARKITEGVVKDEYSHLNFGEVWLQKNFAQSKAELEEANRHNLPIVWKM HHHEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LNQVADDAAVLAMEKEALVEDFMIQYGEALSNIGFTTRDIMRMSAYGLTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MQQVAADLEIDFKSEKYKDAYSRINAIVIEGEQEAYENYIQLSQLLPDDKEDLIRLSKME CCCCCCCCEECCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRHKKGFEACGRNLQVSPDIEFAKEFFAGLHGNFQKAAAEGKVVTCLLIQSLIIECFAIA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH AYNIYIPVADDFARKITEGVVKDEYSHLNFGEVWLQKNFAQSKAELEEANRHNLPIVWKM HHHEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LNQVADDAAVLAMEKEALVEDFMIQYGEALSNIGFTTRDIMRMSAYGLTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA