Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75908743

Identifier: 75908743

GI number: 75908743

Start: 3128266

End: 3129297

Strand: Direct

Name: 75908743

Synonym: Ava_2529

Alternate gene names: NA

Gene position: 3128266-3129297 (Clockwise)

Preceding gene: 75908741

Following gene: 75908747

Centisome position: 49.14

GC content: 47.09

Gene sequence:

>1032_bases
GTGCAATCAACGGATAATATCAACGACCTGGCAGCAGCCTTACAACAGCCTGCGGATCTCACTTTTGAACTGCCCGATCC
CGAAGATGAACAGATTCCAGAGTCAGATTTCCAACAGCAGTTGGATGTAGCTTGGCAGGTATGCGATCGCTTTGATTTGC
AAACCGAAATCTGGCGGGGAAGAATCTTAAGGGCAATCCGCGACAGAGAAAAGAAAGGTGGCGACGGACGTGGTACTGGT
TTTCTCAATTGGCTCAAGGAACGAGAAATCAGTAAGAGTCAAGCTTATGCTTGGATTCAACTGGCCAATAGTGCTGATAC
TCTCCTAGAAGAGGGCAAGCTTGAGCCAAGCGCGGTGAATAATTTTAGTAAACGGGCTTTTGTGGAAACCTCCAAAGCCT
CCCCAGAAGTGCAACAAATGGTCAGTGAAGCCGCCAGCAAAGGCGATCGCATCACTAGGCGCGAAGTCCGTCAACTCACG
GACGAATGGACGGCGATGTCTTCAGATTTATTACCAGAACCAGTCAAGGTAAAAGCCGCAGAAAATTCCCTTCCTCCGCG
CTACATTGCCCCTCTGGTGAAGGAAATGGAAAAACTGCCAGAATCACACCAAAAGTTCATCCAGCGTGAAATAGCTGCCA
ATCCCGACGTTGATACCCTCAAACAAGCCACAACAGAGGCACGACAATTAGGCAAATATCTCAAATCCGCCGCCCAAGTC
CAAGCTTTAACAGAGAATGATGTAGATATTGAAACAGCCCTAGAAGAAGCCCAAAGGGTCGGCTGTCTAAGTGTAGCGGC
TGATTTAGTCAATCAAGCATCCCAAATAGAACAAACTATTGCCAAGTTATACATGACTTGGAAACGCATCAGTAATTTAG
CAGATAGATTATATGTAGATACTGGTGCAAGTACTCCCAACTTGCGATCGCTCCTCAGTTGCATAGAACCCTTGGGTGGT
GAAGTTATGGAAGTGCAACTCAGTGGCGCAACTGAACACACAGTCCGTTTGCAAATTCAGGAAACGAATTAG

Upstream 100 bases:

>100_bases
TGGTTATGTTCGTCAAGCGGACTGAGTCAGCACTCTGTTGAGCCGATGTCACCAGATTGTGTAATAATAAGCCGATCGCT
AGAGTAATAAGTTACCGACT

Downstream 100 bases:

>100_bases
ACACGATTAATCGCGTCTGTACAATTTCTATTCTGTACAAGCTGACGAATGTAGTGTTGGAGTATGAGGATTTACAGTAG
GTGCTTGCGCCACCAGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MQSTDNINDLAAALQQPADLTFELPDPEDEQIPESDFQQQLDVAWQVCDRFDLQTEIWRGRILRAIRDREKKGGDGRGTG
FLNWLKEREISKSQAYAWIQLANSADTLLEEGKLEPSAVNNFSKRAFVETSKASPEVQQMVSEAASKGDRITRREVRQLT
DEWTAMSSDLLPEPVKVKAAENSLPPRYIAPLVKEMEKLPESHQKFIQREIAANPDVDTLKQATTEARQLGKYLKSAAQV
QALTENDVDIETALEEAQRVGCLSVAADLVNQASQIEQTIAKLYMTWKRISNLADRLYVDTGASTPNLRSLLSCIEPLGG
EVMEVQLSGATEHTVRLQIQETN

Sequences:

>Translated_343_residues
MQSTDNINDLAAALQQPADLTFELPDPEDEQIPESDFQQQLDVAWQVCDRFDLQTEIWRGRILRAIRDREKKGGDGRGTG
FLNWLKEREISKSQAYAWIQLANSADTLLEEGKLEPSAVNNFSKRAFVETSKASPEVQQMVSEAASKGDRITRREVRQLT
DEWTAMSSDLLPEPVKVKAAENSLPPRYIAPLVKEMEKLPESHQKFIQREIAANPDVDTLKQATTEARQLGKYLKSAAQV
QALTENDVDIETALEEAQRVGCLSVAADLVNQASQIEQTIAKLYMTWKRISNLADRLYVDTGASTPNLRSLLSCIEPLGG
EVMEVQLSGATEHTVRLQIQETN
>Mature_343_residues
MQSTDNINDLAAALQQPADLTFELPDPEDEQIPESDFQQQLDVAWQVCDRFDLQTEIWRGRILRAIRDREKKGGDGRGTG
FLNWLKEREISKSQAYAWIQLANSADTLLEEGKLEPSAVNNFSKRAFVETSKASPEVQQMVSEAASKGDRITRREVRQLT
DEWTAMSSDLLPEPVKVKAAENSLPPRYIAPLVKEMEKLPESHQKFIQREIAANPDVDTLKQATTEARQLGKYLKSAAQV
QALTENDVDIETALEEAQRVGCLSVAADLVNQASQIEQTIAKLYMTWKRISNLADRLYVDTGASTPNLRSLLSCIEPLGG
EVMEVQLSGATEHTVRLQIQETN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38412; Mature: 38412

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTDNINDLAAALQQPADLTFELPDPEDEQIPESDFQQQLDVAWQVCDRFDLQTEIWRG
CCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
RILRAIRDREKKGGDGRGTGFLNWLKEREISKSQAYAWIQLANSADTLLEEGKLEPSAVN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCHHHHH
NFSKRAFVETSKASPEVQQMVSEAASKGDRITRREVRQLTDEWTAMSSDLLPEPVKVKAA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
ENSLPPRYIAPLVKEMEKLPESHQKFIQREIAANPDVDTLKQATTEARQLGKYLKSAAQV
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QALTENDVDIETALEEAQRVGCLSVAADLVNQASQIEQTIAKLYMTWKRISNLADRLYVD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGASTPNLRSLLSCIEPLGGEVMEVQLSGATEHTVRLQIQETN
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MQSTDNINDLAAALQQPADLTFELPDPEDEQIPESDFQQQLDVAWQVCDRFDLQTEIWRG
CCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
RILRAIRDREKKGGDGRGTGFLNWLKEREISKSQAYAWIQLANSADTLLEEGKLEPSAVN
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCHHHHH
NFSKRAFVETSKASPEVQQMVSEAASKGDRITRREVRQLTDEWTAMSSDLLPEPVKVKAA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
ENSLPPRYIAPLVKEMEKLPESHQKFIQREIAANPDVDTLKQATTEARQLGKYLKSAAQV
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QALTENDVDIETALEEAQRVGCLSVAADLVNQASQIEQTIAKLYMTWKRISNLADRLYVD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGASTPNLRSLLSCIEPLGGEVMEVQLSGATEHTVRLQIQETN
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA