| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908748
Identifier: 75908748
GI number: 75908748
Start: 3134326
End: 3135345
Strand: Direct
Name: 75908748
Synonym: Ava_2534
Alternate gene names: NA
Gene position: 3134326-3135345 (Clockwise)
Preceding gene: 75908747
Following gene: 75908749
Centisome position: 49.24
GC content: 42.94
Gene sequence:
>1020_bases ATGTTTGGTCTAATTGGACATCTGACAAGTTTAGAACACGCTCAAGCGGTAGCTCAAGAACTGGGATACCCAGAATACGC CGACCAAGGGCTAGATTTTTGGTGCAGCGCTCCACCGCAAATAGTTGACCACATTAAAGTTACTAGCATTACTGGTGAAA TAATTGAAGGGAGGTATGTAGAATCTTGCTTTTTACCAGAAATGCTAGCCAGCCGTAGGATTAAAGCCGCAACCCGCAAA GTCCTCAATGCTATGGCTCATGCTCAAAAACATGGCATTGACATCACCGCTTTGGGTGGTTTCTCCTCCATTATTTTTGA AAACTTCAAATTGGAACAGTTTAGCCAAGTTCGTAATGTCACACTAGAGTTTGAACGCTTCACTACAGGCAACACTCACA CAGCTTATATCATTTGTCGGCAGGTAGAACAAGCATCACAACAACTCGGCATTGAACTCTCCCAAGCAACAGTAGCTATA TGTGGGGCTACTGGTGACATTGGTAGTGCAGTTACTCGCTGGCTGGATGCCAAAACAGACGTAAAAGAATTACTGTTAAT CGCCCGTAATCAAGAACGTCTCCAAGAGTTGCAAAGCGAGTTGGGACGCGGTAAAATCATGAGCCTAGATGAAGCATTGC CTCAAGCTGATATTGTAGTTTGGGTAGCTAGTATGCCTAAAGGCGTGGAAATTAATCCTCAAGTTTTGAAACAACCCTGT TTATTGATTGATGGTGGTTATCCGAAAAACTTGGGTACAAAAGTTCAGTATCCTGGTGTTTATGTACTGAACGGAGGTAT CGTCGAACATTCCCTAGATATTGACTGGAAAATCATGAAAATAGTCAATATGGATGTACCTGCACGCCAATTATTTGCTT GTTTTGCGGAATCTATGCTCTTGGAATTTGAGAAGTTGTACACGAACTTTTCTTGGGGGCGCAATCAGATTACCGTAGAC AAAATGGAGCAGATTGGTCAAGCATCAGTGAAACATGGGTTTAGACCACTGCTGGTTTAG
Upstream 100 bases:
>100_bases CATTCATCACAGTTTGTATAGTATTTTTAAGAGTTAAGTATTATCTCTTATCCACATATCCCACGCATTCGCCAAGACAC AAGCCTAAATATATCACTCC
Downstream 100 bases:
>100_bases GGACTGGGGACTGGGGACTGGGGATTAAGAAGAAAAATAGACCCTAGTCACAAGATTGTACCCAATCCCCAATACCCAAT TCCTAATACCCACTACCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydrogenase; Dehydrogenase-Like Protein; Acyl-ACP Reductase; Aminotransferase Class-III; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MFGLIGHLTSLEHAQAVAQELGYPEYADQGLDFWCSAPPQIVDHIKVTSITGEIIEGRYVESCFLPEMLASRRIKAATRK VLNAMAHAQKHGIDITALGGFSSIIFENFKLEQFSQVRNVTLEFERFTTGNTHTAYIICRQVEQASQQLGIELSQATVAI CGATGDIGSAVTRWLDAKTDVKELLLIARNQERLQELQSELGRGKIMSLDEALPQADIVVWVASMPKGVEINPQVLKQPC LLIDGGYPKNLGTKVQYPGVYVLNGGIVEHSLDIDWKIMKIVNMDVPARQLFACFAESMLLEFEKLYTNFSWGRNQITVD KMEQIGQASVKHGFRPLLV
Sequences:
>Translated_339_residues MFGLIGHLTSLEHAQAVAQELGYPEYADQGLDFWCSAPPQIVDHIKVTSITGEIIEGRYVESCFLPEMLASRRIKAATRK VLNAMAHAQKHGIDITALGGFSSIIFENFKLEQFSQVRNVTLEFERFTTGNTHTAYIICRQVEQASQQLGIELSQATVAI CGATGDIGSAVTRWLDAKTDVKELLLIARNQERLQELQSELGRGKIMSLDEALPQADIVVWVASMPKGVEINPQVLKQPC LLIDGGYPKNLGTKVQYPGVYVLNGGIVEHSLDIDWKIMKIVNMDVPARQLFACFAESMLLEFEKLYTNFSWGRNQITVD KMEQIGQASVKHGFRPLLV >Mature_339_residues MFGLIGHLTSLEHAQAVAQELGYPEYADQGLDFWCSAPPQIVDHIKVTSITGEIIEGRYVESCFLPEMLASRRIKAATRK VLNAMAHAQKHGIDITALGGFSSIIFENFKLEQFSQVRNVTLEFERFTTGNTHTAYIICRQVEQASQQLGIELSQATVAI CGATGDIGSAVTRWLDAKTDVKELLLIARNQERLQELQSELGRGKIMSLDEALPQADIVVWVASMPKGVEINPQVLKQPC LLIDGGYPKNLGTKVQYPGVYVLNGGIVEHSLDIDWKIMKIVNMDVPARQLFACFAESMLLEFEKLYTNFSWGRNQITVD KMEQIGQASVKHGFRPLLV
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37725; Mature: 37725
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLIGHLTSLEHAQAVAQELGYPEYADQGLDFWCSAPPQIVDHIKVTSITGEIIEGRYV CCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCHHHHHCEEEEEECHHHHCCCHH ESCFLPEMLASRRIKAATRKVLNAMAHAQKHGIDITALGGFSSIIFENFKLEQFSQVRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHCC TLEFERFTTGNTHTAYIICRQVEQASQQLGIELSQATVAICGATGDIGSAVTRWLDAKTD EEEEEEEECCCCEEEEEEHHHHHHHHHHHCCEEECCEEEEECCCCCHHHHHHHHHCCCCC VKELLLIARNQERLQELQSELGRGKIMSLDEALPQADIVVWVASMPKGVEINPQVLKQPC HHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCC LLIDGGYPKNLGTKVQYPGVYVLNGGIVEHSLDIDWKIMKIVNMDVPARQLFACFAESML EEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH LEFEKLYTNFSWGRNQITVDKMEQIGQASVKHGFRPLLV HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFGLIGHLTSLEHAQAVAQELGYPEYADQGLDFWCSAPPQIVDHIKVTSITGEIIEGRYV CCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCHHHHHCEEEEEECHHHHCCCHH ESCFLPEMLASRRIKAATRKVLNAMAHAQKHGIDITALGGFSSIIFENFKLEQFSQVRNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHHHHCC TLEFERFTTGNTHTAYIICRQVEQASQQLGIELSQATVAICGATGDIGSAVTRWLDAKTD EEEEEEEECCCCEEEEEEHHHHHHHHHHHCCEEECCEEEEECCCCCHHHHHHHHHCCCCC VKELLLIARNQERLQELQSELGRGKIMSLDEALPQADIVVWVASMPKGVEINPQVLKQPC HHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCC LLIDGGYPKNLGTKVQYPGVYVLNGGIVEHSLDIDWKIMKIVNMDVPARQLFACFAESML EEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHH LEFEKLYTNFSWGRNQITVDKMEQIGQASVKHGFRPLLV HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA