| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is cinA [C]
Identifier: 75908299
GI number: 75908299
Start: 2569378
End: 2570628
Strand: Direct
Name: cinA [C]
Synonym: Ava_2078
Alternate gene names: 75908299
Gene position: 2569378-2570628 (Clockwise)
Preceding gene: 75908298
Following gene: 75908300
Centisome position: 40.36
GC content: 45.0
Gene sequence:
>1251_bases ATGAGTGCAGAAATTATTTGTGTTGGTACTGAACTGCTTTTAGGTGACATCCTCAACGGAAATGCTCAATATTTAGCACA GCAACTAGCCCAGTTAGGTATCCCCCATTACCATCAAACGGTAGTTGGGGATAATCCAGACCGAATTAAGCAAGTTATAG AAATTGCTATTTCCAGGGCTAATATTCTGATTTTTACAGGTGGTCTAGGCCCTACACCAGATGACCTGACTTGTGAAACC ATCGCTGATTTTTTCGGTTCGCCTTTGGTAGAAAGTCCCGAAATTATCGAAGATATTACGCAGAAATTTGCTCAACGCGG TCGAGTGATGACACCAAGTAACCGCAAACAAGCTTTGATTCCTCAAGGCGCAGACATATTACCGAATCCCACTGGGACAG CTCCTGGTATCATCTGGGAACCTCGTCCTGATATGACAATTTTTACCTTTCCTGGTGTGCCTAGTGAAATGCACCGGATG TGGCAAGAAACAGCAGTACCATTTCTCAAAAATCAAGGCTGGGGTCAAGAGATTATTTATAGTCGCAGTCTCAAGTTTTG GGGAATTGGTGAATCTGCATTAGCAGAAAAGGTGACAGCTTATTTAAACTTACCTAACCCTACGGTAGCTCCCTACGCCG GGAAGGGAGAAGTCAGGCTACGTGTTTCGGCAAAAGCCCCTTCAGAAGTAGCCGCAGAGGCTTTGATTGCACCAGTGGAG AAGCAAATTAAAGACATTGCTGGCTTAGATTTTTATGGTGTCAATCATGATAGTTTAGCTTCCGTTGTCGGTGAGTTATT GCGGAGTTCAGGGGAAACCTTATCGGTAGCAGAATCCTGTACTGGTGGTTTGTTGGGGCAAATGTTGACGGAGATTTCCG GTAGTTCTGATTACTTTTGGGGTGGGGTAATTTCTTACGACAACTCGGTGAAGGCTGGGTTGTTAGGAGTGAACCCAGAA GATTTAGACAAATTAGGCGCAGTCAGCGATACTGTAGCCGAACAAATGGCTATAGGTGTAAAAACCCGTTTATCAACAAC TTGGGCATTGAGTATTACGGGGATTGCTGGCCCAAACGGAGGGACAGAAACTAAGCCTGTGGGTTTGGTTTATATCGGGT TAGCTGGGCCAGGGGATGAAGTGACAAGCTTTAAATATAATTTTGGTACAATGCGCGATCGCTCTTTTATTCGTCATTTA AGTGCTTGTACAGCCCTGGATTTGCTACGGCGGCGCTTGTTGACAAGGTGA
Upstream 100 bases:
>100_bases AGTTACGTTATTTGGCGAGCTTGGAGGGTTTCTCAGCAAAAGTGAAAAGGTAAAAGCAATAAAGTAGTATTAGCATCTTT TGCCTTTTTCCTTAAATTAC
Downstream 100 bases:
>100_bases TATACTCCCACACTTGGTGCAAACTGTAAGTGTGGGAGTATATCACCGAATCCGGGTATCTCGTCAGACAACAACTTTAC CTAACATAATTCTCACCAAA
Product: competence damage-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSAEIICVGTELLLGDILNGNAQYLAQQLAQLGIPHYHQTVVGDNPDRIKQVIEIAISRANILIFTGGLGPTPDDLTCET IADFFGSPLVESPEIIEDITQKFAQRGRVMTPSNRKQALIPQGADILPNPTGTAPGIIWEPRPDMTIFTFPGVPSEMHRM WQETAVPFLKNQGWGQEIIYSRSLKFWGIGESALAEKVTAYLNLPNPTVAPYAGKGEVRLRVSAKAPSEVAAEALIAPVE KQIKDIAGLDFYGVNHDSLASVVGELLRSSGETLSVAESCTGGLLGQMLTEISGSSDYFWGGVISYDNSVKAGLLGVNPE DLDKLGAVSDTVAEQMAIGVKTRLSTTWALSITGIAGPNGGTETKPVGLVYIGLAGPGDEVTSFKYNFGTMRDRSFIRHL SACTALDLLRRRLLTR
Sequences:
>Translated_416_residues MSAEIICVGTELLLGDILNGNAQYLAQQLAQLGIPHYHQTVVGDNPDRIKQVIEIAISRANILIFTGGLGPTPDDLTCET IADFFGSPLVESPEIIEDITQKFAQRGRVMTPSNRKQALIPQGADILPNPTGTAPGIIWEPRPDMTIFTFPGVPSEMHRM WQETAVPFLKNQGWGQEIIYSRSLKFWGIGESALAEKVTAYLNLPNPTVAPYAGKGEVRLRVSAKAPSEVAAEALIAPVE KQIKDIAGLDFYGVNHDSLASVVGELLRSSGETLSVAESCTGGLLGQMLTEISGSSDYFWGGVISYDNSVKAGLLGVNPE DLDKLGAVSDTVAEQMAIGVKTRLSTTWALSITGIAGPNGGTETKPVGLVYIGLAGPGDEVTSFKYNFGTMRDRSFIRHL SACTALDLLRRRLLTR >Mature_415_residues SAEIICVGTELLLGDILNGNAQYLAQQLAQLGIPHYHQTVVGDNPDRIKQVIEIAISRANILIFTGGLGPTPDDLTCETI ADFFGSPLVESPEIIEDITQKFAQRGRVMTPSNRKQALIPQGADILPNPTGTAPGIIWEPRPDMTIFTFPGVPSEMHRMW QETAVPFLKNQGWGQEIIYSRSLKFWGIGESALAEKVTAYLNLPNPTVAPYAGKGEVRLRVSAKAPSEVAAEALIAPVEK QIKDIAGLDFYGVNHDSLASVVGELLRSSGETLSVAESCTGGLLGQMLTEISGSSDYFWGGVISYDNSVKAGLLGVNPED LDKLGAVSDTVAEQMAIGVKTRLSTTWALSITGIAGPNGGTETKPVGLVYIGLAGPGDEVTSFKYNFGTMRDRSFIRHLS ACTALDLLRRRLLTR
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=416, Percent_Identity=28.8461538461538, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789052, Length=156, Percent_Identity=40.3846153846154, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1787818, Length=133, Percent_Identity=30.0751879699248, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 44686; Mature: 44554
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEIICVGTELLLGDILNGNAQYLAQQLAQLGIPHYHQTVVGDNPDRIKQVIEIAISRA CCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCC NILIFTGGLGPTPDDLTCETIADFFGSPLVESPEIIEDITQKFAQRGRVMTPSNRKQALI CEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEC PQGADILPNPTGTAPGIIWEPRPDMTIFTFPGVPSEMHRMWQETAVPFLKNQGWGQEIIY CCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCHHHHH SRSLKFWGIGESALAEKVTAYLNLPNPTVAPYAGKGEVRLRVSAKAPSEVAAEALIAPVE HCCCEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH KQIKDIAGLDFYGVNHDSLASVVGELLRSSGETLSVAESCTGGLLGQMLTEISGSSDYFW HHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEE GGVISYDNSVKAGLLGVNPEDLDKLGAVSDTVAEQMAIGVKTRLSTTWALSITGIAGPNG CCEEECCCCCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCC GTETKPVGLVYIGLAGPGDEVTSFKYNFGTMRDRSFIRHLSACTALDLLRRRLLTR CCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAEIICVGTELLLGDILNGNAQYLAQQLAQLGIPHYHQTVVGDNPDRIKQVIEIAISRA CCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCC NILIFTGGLGPTPDDLTCETIADFFGSPLVESPEIIEDITQKFAQRGRVMTPSNRKQALI CEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEC PQGADILPNPTGTAPGIIWEPRPDMTIFTFPGVPSEMHRMWQETAVPFLKNQGWGQEIIY CCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCHHHHH SRSLKFWGIGESALAEKVTAYLNLPNPTVAPYAGKGEVRLRVSAKAPSEVAAEALIAPVE HCCCEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH KQIKDIAGLDFYGVNHDSLASVVGELLRSSGETLSVAESCTGGLLGQMLTEISGSSDYFW HHHHHHHCCEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEE GGVISYDNSVKAGLLGVNPEDLDKLGAVSDTVAEQMAIGVKTRLSTTWALSITGIAGPNG CCEEECCCCCCCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCC GTETKPVGLVYIGLAGPGDEVTSFKYNFGTMRDRSFIRHLSACTALDLLRRRLLTR CCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]