| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676504
Identifier: 75676504
GI number: 75676504
Start: 2537868
End: 2539253
Strand: Direct
Name: 75676504
Synonym: Nwi_2319
Alternate gene names: NA
Gene position: 2537868-2539253 (Clockwise)
Preceding gene: 75676503
Following gene: 75676505
Centisome position: 74.6
GC content: 64.07
Gene sequence:
>1386_bases ATGTCCAACTCCTTCTCAGCCCTGGCTCTGCACCGCACGGTCTGGCGCTGGCATTTCTATGCCGGTCTCGTGGTCGCACC CTTCATGTTCATTCTCGCCGTGACGGGCGCGATCTATCTCTTCAATGACGAGATCAACGATGTGCTCCATCGTGATCTAC GCATTGTCGCGCCGGTGTCCGAACCGGCGCCGCTCAGCAAGATGGCCGAGGCTGCGATCACCGCCTATCCCGGCGGAAAG GTCACCCGCATCGATACGGCTCGGGCGACGAACCGCAGCGTGGAAGTATTCGTGACACCGGCGACAGGTGATGCGGTCCG CGTGTTCGTTGATCCCGGCACCGGGCGGGTTCTCGGCTCCTATGTCTATGCCCGCACGCTGGTCGGCTTCGCCGACATCG CGCACGGCTCGCTGACGCTGGGGAGCATCGGCGACAATATCGTCGAACTCGCTGCCTGCTGGGGCTTCATCCTCGTGGCG ACAGGCCTTTACCTGTGGTGGCCGCGCGGCCGCTTCCGTCTCGGCGGTGTTCTCTATCCACGAATTGGCCGGCGCGGACG GCCGTTCTGGAAGGAATGGCACGCGGTGGTGGGCATGTGGTCCGCCTTTCTCATCATGTTCCTGATCCTCACGGGCCTGC CATGGGCATCCTTCTGGGGCGACTTGCTGCGCCGCGGCACCGACCTCGCCGGCATCGGCTATCCGGCAAATCACAGGCTT CAAGGAACGACGCCGTCCACGACGACGGTCAAGGACGCAGCGGGCAATGCCGCGCCCTGGACGCTGGAGCAGGCGCCGAT TCCGGATTCCGATCCGCATGCCGGGCATCACGGGCACATCACCTCCGCGCCCGCCGCGAAACGCATGCTCGGCGTCGACG ACGTTGCCGCGATCCTGACGCGCGAGGGTTTGATGGCTCCGTATCGCCTGATCCTGCCGAAGAACGCCAGCGGCGTGTTC ACCGCCTTCAGCTATCCCGATCAGCCGGAGACGCAGCGCACGCTCCATGTTGATCAGTACTCAGGTCGCGTGATCGGCGA TGTCCGTTTCGCCGACTATGGATGGGCCGCGAAGGCCGTGGAACTCGGCGTCCAGATCCACATGGGCAACTACTTCGGAC GCCTCAACCAGATCGTGATGCTGATCCCCTGTATCGGCATCATCGTCCTGACGATCACAGGTCCCCTCATGTGGTGGCGG CGACGTCCGAAAGGAGAATTTGCAGCGCCGCAGCCGCTATCTTCTCCACGGCTGCGCACGTCGGCGATGATCGTCATCGG GCTCTGCGTGATGTTCCCGCTGGCGGGGGCGTCACTGGCGCTGGCGATGATTGCCGACTGGGTGTGGGAACAATCGCCTG CGTACCGGCTTCGGCCCGGACAGTGA
Upstream 100 bases:
>100_bases TCGACCTCTCCTACAACGTCAGGTTCTGATGCGTGAAACACGGCGTCTCGCCGGTGCTCCGATGAGGCGTCCCCATTCCG ATGTCTGAAAGCAAACGCCG
Downstream 100 bases:
>100_bases AGGGATCAGCAAACAATCGCGGCGCAACAAGCGCGTCGCGATTTGCCGGCGGCTTGCCTTGTGCGCCTTCCCTGTCCTAT ATCGGGCGCACGCCGCCTTG
Product: propeptide, PepSY amd peptidase M4
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; Sulfite Reductase; PepSY-Associated TM Helix Family; Peptidase; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix; PepSY-Associated TM Helix Family Protein; Iron-Uptake Factor; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; Sulfite Reductase Flavoprotein Component; Sulfite Reductase Flavoprotein Alpha-Component; Transmembrane Protein; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Oxidoreductase; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Bifunctional Protein Flavoprotein Alpha-Component; Transporter-Like Membrane Protein; Bifunctional Sulfite Reductase; Sulfite Reductase Flavoprotein Subunit Alpha; Protein Containing PepSY-Associated TM Helix; Transmembrane Transporter; Iron-Regulated Transmembrane Protein
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGK VTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVA TGLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVF TAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWR RRPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ
Sequences:
>Translated_461_residues MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGK VTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVA TGLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVF TAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWR RRPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ >Mature_460_residues SNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVSEPAPLSKMAEAAITAYPGGKV TRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGSYVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVAT GLYLWWPRGRFRLGGVLYPRIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRLQ GTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILTREGLMAPYRLILPKNASGVFT AFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAVELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRR RPKGEFAAPQPLSSPRLRTSAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50544; Mature: 50413
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCEEEEECCC EPAPLSKMAEAAITAYPGGKVTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGS CCCCHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHH YVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVATGLYLWWPRGRFRLGGVLYP HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHEECCCCCEEECCEECC RIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILT CCCCCCCCEEHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH REGLMAPYRLILPKNASGVFTAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAV HCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHH ELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRRRPKGEFAAPQPLSSPRLRT HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH SAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNSFSALALHRTVWRWHFYAGLVVAPFMFILAVTGAIYLFNDEINDVLHRDLRIVAPVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHCCEEEEECCC EPAPLSKMAEAAITAYPGGKVTRIDTARATNRSVEVFVTPATGDAVRVFVDPGTGRVLGS CCCCHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHH YVYARTLVGFADIAHGSLTLGSIGDNIVELAACWGFILVATGLYLWWPRGRFRLGGVLYP HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCHHEECCCCCEEECCEECC RIGRRGRPFWKEWHAVVGMWSAFLIMFLILTGLPWASFWGDLLRRGTDLAGIGYPANHRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC QGTTPSTTTVKDAAGNAAPWTLEQAPIPDSDPHAGHHGHITSAPAAKRMLGVDDVAAILT CCCCCCCCEEHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH REGLMAPYRLILPKNASGVFTAFSYPDQPETQRTLHVDQYSGRVIGDVRFADYGWAAKAV HCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHH ELGVQIHMGNYFGRLNQIVMLIPCIGIIVLTITGPLMWWRRRPKGEFAAPQPLSSPRLRT HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH SAMIVIGLCVMFPLAGASLALAMIADWVWEQSPAYRLRPGQ HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA