Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is yfeW [C]

Identifier: 75676473

GI number: 75676473

Start: 2501580

End: 2502854

Strand: Direct

Name: yfeW [C]

Synonym: Nwi_2288

Alternate gene names: 75676473

Gene position: 2501580-2502854 (Clockwise)

Preceding gene: 75676465

Following gene: 75676476

Centisome position: 73.53

GC content: 62.98

Gene sequence:

>1275_bases
ATGACAACCCACAATTCCGGCTCTCCCGAAGCTTCAGGGATGTCCAGCGTCGCGCTCGCGCGCATTGATGATCACCTGAA
GCGACGATACATCGATGCCGGCCGGTTTCCGGGCACACAGCTGATGGTGTATCGCCGCGGCAGCCTCGTGCACCACTCCG
TGCAGGGTTTCGCCGATCTGGAACGCAAGGTGCGGCTGAAGGGCGACGCCATCTTCCGCATCTATTCCATGACCAAGCCG
ATCACCTCGGTGGCTTTCATGATGCTGGTGGAACAGGGCCTGGTTGCGCTCGACGATCCCGTTCACAGGTATATTCCCGA
ATGGAAGAACCTTGGCGTGTTCCAGGCGGGCGCCGCGCCTGCTTTCATGACCAGGCCGCCGTCGCGGCCGATGCAGATCG
TCGACCTGCTCCGCCACACATCCGGACTGACCTACGGTTTCCAGCAGCGGACCAACGTCGACGCGGCGTATCGCGACAAG
CGGATCGGCACGCTCGACCCTGAGGGAACGCTCGCTTCGATGATCGCAGATCTTGCCGGTATTCCGCTGGAATTCTCGCC
GGGCGAGGCCTGGAATTACTCGGTCTCCACGGATGTGATCGGCTATCTCATCGGCAGGATCAGCGGCATTCCCTTCGACC
GGTACTTGAAAGAGCGCATTTTCGACCCGTTGGAAATGGCCGACACCGGCTTCTTCGTGCCGGCCGGCAAGGCGCACCGG
CTCGCGGCCTGCTATAGCGCTGATGCAGGCGGCATGGTGCCGGCCCGTTCGCCGGGTGCGACGAGTGGACTGACGTTGCA
GGACGATCCCGCCACCAGCCCGTTTCTCTCCCCGCCCGGCTTCGTCTCGGGAGGCGGCGGCCTGTGCTCGACGGCCACCG
ACTACCTCACCTTCTGCCGGGCGCTGCTCAACGGCGGTGAACTCGGGGGCGTCAGGCTGATCGGGCCGAAAACGCTGGCG
CTGATGACGAGCAATCATCTGCCCGGCAATCGGGACTTGCCGGAGATGTCGCGATCCATGTTCGCGGAGGCGACCTACAG
CGGCATCGGCTTCGGACTCGGCTTCGCCGTCACCATCAATCCCGCAAAGACGCTGATAGCCGGAAGTCCCGGCGAATATG
CCTGGGGCGGCGTTGCGACGACGTCGTTCTGGATCGATCCGGCGGAAGAGTTGATCGCCATCTTCATGACGCAGGTGATC
CCTTCGACCGCCTATCCTGTCCGACGCGAACTTCGCACCATGGTGTATGCGGCCATCACCGACTCCAATCCTTGA

Upstream 100 bases:

>100_bases
GGAACCGCGGTTCACAATCGACCGGGTCATGCGGCACATCGTGTAGGCGGACCCGGCTTGATCGATCCGAAACTGGCCCT
CTCACCCGGAGCGACCCCAG

Downstream 100 bases:

>100_bases
GCGACATTGCTTAAGGTACTCAAGCCTCGACGCTTATTTCGTCGTTCACTCACTCGCCGGCCGATGCGAGCGTGCGCTTC
GCCGCGATCAGGTGCGGAAT

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTTHNSGSPEASGMSSVALARIDDHLKRRYIDAGRFPGTQLMVYRRGSLVHHSVQGFADLERKVRLKGDAIFRIYSMTKP
ITSVAFMMLVEQGLVALDDPVHRYIPEWKNLGVFQAGAAPAFMTRPPSRPMQIVDLLRHTSGLTYGFQQRTNVDAAYRDK
RIGTLDPEGTLASMIADLAGIPLEFSPGEAWNYSVSTDVIGYLIGRISGIPFDRYLKERIFDPLEMADTGFFVPAGKAHR
LAACYSADAGGMVPARSPGATSGLTLQDDPATSPFLSPPGFVSGGGGLCSTATDYLTFCRALLNGGELGGVRLIGPKTLA
LMTSNHLPGNRDLPEMSRSMFAEATYSGIGFGLGFAVTINPAKTLIAGSPGEYAWGGVATTSFWIDPAEELIAIFMTQVI
PSTAYPVRRELRTMVYAAITDSNP

Sequences:

>Translated_424_residues
MTTHNSGSPEASGMSSVALARIDDHLKRRYIDAGRFPGTQLMVYRRGSLVHHSVQGFADLERKVRLKGDAIFRIYSMTKP
ITSVAFMMLVEQGLVALDDPVHRYIPEWKNLGVFQAGAAPAFMTRPPSRPMQIVDLLRHTSGLTYGFQQRTNVDAAYRDK
RIGTLDPEGTLASMIADLAGIPLEFSPGEAWNYSVSTDVIGYLIGRISGIPFDRYLKERIFDPLEMADTGFFVPAGKAHR
LAACYSADAGGMVPARSPGATSGLTLQDDPATSPFLSPPGFVSGGGGLCSTATDYLTFCRALLNGGELGGVRLIGPKTLA
LMTSNHLPGNRDLPEMSRSMFAEATYSGIGFGLGFAVTINPAKTLIAGSPGEYAWGGVATTSFWIDPAEELIAIFMTQVI
PSTAYPVRRELRTMVYAAITDSNP
>Mature_423_residues
TTHNSGSPEASGMSSVALARIDDHLKRRYIDAGRFPGTQLMVYRRGSLVHHSVQGFADLERKVRLKGDAIFRIYSMTKPI
TSVAFMMLVEQGLVALDDPVHRYIPEWKNLGVFQAGAAPAFMTRPPSRPMQIVDLLRHTSGLTYGFQQRTNVDAAYRDKR
IGTLDPEGTLASMIADLAGIPLEFSPGEAWNYSVSTDVIGYLIGRISGIPFDRYLKERIFDPLEMADTGFFVPAGKAHRL
AACYSADAGGMVPARSPGATSGLTLQDDPATSPFLSPPGFVSGGGGLCSTATDYLTFCRALLNGGELGGVRLIGPKTLAL
MTSNHLPGNRDLPEMSRSMFAEATYSGIGFGLGFAVTINPAKTLIAGSPGEYAWGGVATTSFWIDPAEELIAIFMTQVIP
STAYPVRRELRTMVYAAITDSNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=412, Percent_Identity=25.9708737864078, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 45717; Mature: 45586

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHNSGSPEASGMSSVALARIDDHLKRRYIDAGRFPGTQLMVYRRGSLVHHSVQGFADL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH
ERKVRLKGDAIFRIYSMTKPITSVAFMMLVEQGLVALDDPVHRYIPEWKNLGVFQAGAAP
HHHHEECCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCEEECCCCC
AFMTRPPSRPMQIVDLLRHTSGLTYGFQQRTNVDAAYRDKRIGTLDPEGTLASMIADLAG
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHC
IPLEFSPGEAWNYSVSTDVIGYLIGRISGIPFDRYLKERIFDPLEMADTGFFVPAGKAHR
CCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCEECCCCCCHH
LAACYSADAGGMVPARSPGATSGLTLQDDPATSPFLSPPGFVSGGGGLCSTATDYLTFCR
EEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALLNGGELGGVRLIGPKTLALMTSNHLPGNRDLPEMSRSMFAEATYSGIGFGLGFAVTIN
HHHCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
PAKTLIAGSPGEYAWGGVATTSFWIDPAEELIAIFMTQVIPSTAYPVRRELRTMVYAAIT
CHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEE
DSNP
CCCC
>Mature Secondary Structure 
TTHNSGSPEASGMSSVALARIDDHLKRRYIDAGRFPGTQLMVYRRGSLVHHSVQGFADL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH
ERKVRLKGDAIFRIYSMTKPITSVAFMMLVEQGLVALDDPVHRYIPEWKNLGVFQAGAAP
HHHHEECCCEEEEEEHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCEEECCCCC
AFMTRPPSRPMQIVDLLRHTSGLTYGFQQRTNVDAAYRDKRIGTLDPEGTLASMIADLAG
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHC
IPLEFSPGEAWNYSVSTDVIGYLIGRISGIPFDRYLKERIFDPLEMADTGFFVPAGKAHR
CCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCEECCCCCCHH
LAACYSADAGGMVPARSPGATSGLTLQDDPATSPFLSPPGFVSGGGGLCSTATDYLTFCR
EEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALLNGGELGGVRLIGPKTLALMTSNHLPGNRDLPEMSRSMFAEATYSGIGFGLGFAVTIN
HHHCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
PAKTLIAGSPGEYAWGGVATTSFWIDPAEELIAIFMTQVIPSTAYPVRRELRTMVYAAIT
CHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEE
DSNP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]