| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is pksS [H]
Identifier: 75676464
GI number: 75676464
Start: 2488894
End: 2490090
Strand: Direct
Name: pksS [H]
Synonym: Nwi_2279
Alternate gene names: 75676464
Gene position: 2488894-2490090 (Clockwise)
Preceding gene: 75676459
Following gene: 75676465
Centisome position: 73.16
GC content: 62.82
Gene sequence:
>1197_bases ATGTCCAGCCCTGCCCCCGTCACCGACTGGGTTCACGATTTTGACCATACCGACCCTCGCTGGACCGAAAATCCTTACCC GATCTGGGACGATCTGCGCGCCAGGTGTCCCATCGCTCACACCAACCGCTTTCTCGGGGTCTACCTGCCGACCACCTATG AGGCGGTCAAGGAAATCTCCCGCGACACCGAGCATTTTTCTTCGCGCCGCGTAGTGGTTCGCAATTTCCGCCCGGAGCCG CCGCCGCCGGCGCCGCCGATCACATCGGACCCGCCCGCGCACAAGCACGCCAAGCAGATCCTGCTCCCGCCTTTTGCGCC GGAAGCCGTGGCGAAGCTGAAGCCGAGGATACGCGCGATCTGCAATGAACTGATCGACGGCTTCATAAACGAGAAAGGCT GCGACGCGGCGGCCCGCTATACGCGATACATTCCGACCCGCGCCATCACCATCATGCTGGGCGTCCCGGAAAAGGACGGC GATCTCTTCATCAAGTGGATTCACGAGATACTTGAAGTCGGCCTGAATGATGACGCGGCGGTGATGCAGGCCGTTCGTGA AATGGTCGGCTATTTCGCCGAGCAGATCGAAGCAAGAAAGAAGCACCCGACCGACGACCTGATCGCGACATTGATGAATG CGCGGAGCGAGGACGGGCAACCGCTGACGGATATGCACGTCCAGGGCGCTCTGCGGTTGCTGCTGGTCGCCGGCATCGAC ACCGCGTGGAGCGCCATCGGCTCCTCGTTGTGGCATCTCGCGCAAACGCCGGCGGATCGCGAGCGTCTCATCGCAGAACC CGAACTGATACCGACCGCCATCGAGGAATTCCTGCGCGCTTTCGCGCCGGCCACATCGGGGCGCGAGGTCATGAAAGAAA CCACCGTGAGCGGCTGTCCGATGAAGCCCGGCAACATGGTGCTGCTGTCCTTCCCGGCCGCCAACCGCGACCCGGCTGTC TTTCCCGATGCGGACAAGATCATCATCGACCGCAAGGAGAACCGCCACATCGCTTTCGGCGTCGGCATCCATCGCTGCGT CGGCGCTCACCTTGCCCGCATGGAGATGCTTGTTGCGATCGAGGAGTGGCTCAAACGAATTCCGGAGTTCCGGCTTGATC CGTCGGGCGGGGTGAAGTGGTCCGAGGGCAGCGTGCGCGGCCCACGCCAGCTTCCGCTGCTGCTCGGCAAGGCTTGA
Upstream 100 bases:
>100_bases AGATCGCTCTCATTATCGAGAAGGACCGAGGTCGTATTTTGATAGTTCAAGCGCCAGCGATCCGGCGTCGGACGGTGGCG ATCATTTCCCGGAGGAATCG
Downstream 100 bases:
>100_bases AGTCTGATTCGACTGCGCAAAAGAAGGAAGCCAGACGTGCCGCACGAACGTTTCCAGTTTTCGGGATCAGGCGGTCATAA ACTCGCCGCCACGCTGGACC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSSPAPVTDWVHDFDHTDPRWTENPYPIWDDLRARCPIAHTNRFLGVYLPTTYEAVKEISRDTEHFSSRRVVVRNFRPEP PPPAPPITSDPPAHKHAKQILLPPFAPEAVAKLKPRIRAICNELIDGFINEKGCDAAARYTRYIPTRAITIMLGVPEKDG DLFIKWIHEILEVGLNDDAAVMQAVREMVGYFAEQIEARKKHPTDDLIATLMNARSEDGQPLTDMHVQGALRLLLVAGID TAWSAIGSSLWHLAQTPADRERLIAEPELIPTAIEEFLRAFAPATSGREVMKETTVSGCPMKPGNMVLLSFPAANRDPAV FPDADKIIIDRKENRHIAFGVGIHRCVGAHLARMEMLVAIEEWLKRIPEFRLDPSGGVKWSEGSVRGPRQLPLLLGKA
Sequences:
>Translated_398_residues MSSPAPVTDWVHDFDHTDPRWTENPYPIWDDLRARCPIAHTNRFLGVYLPTTYEAVKEISRDTEHFSSRRVVVRNFRPEP PPPAPPITSDPPAHKHAKQILLPPFAPEAVAKLKPRIRAICNELIDGFINEKGCDAAARYTRYIPTRAITIMLGVPEKDG DLFIKWIHEILEVGLNDDAAVMQAVREMVGYFAEQIEARKKHPTDDLIATLMNARSEDGQPLTDMHVQGALRLLLVAGID TAWSAIGSSLWHLAQTPADRERLIAEPELIPTAIEEFLRAFAPATSGREVMKETTVSGCPMKPGNMVLLSFPAANRDPAV FPDADKIIIDRKENRHIAFGVGIHRCVGAHLARMEMLVAIEEWLKRIPEFRLDPSGGVKWSEGSVRGPRQLPLLLGKA >Mature_397_residues SSPAPVTDWVHDFDHTDPRWTENPYPIWDDLRARCPIAHTNRFLGVYLPTTYEAVKEISRDTEHFSSRRVVVRNFRPEPP PPAPPITSDPPAHKHAKQILLPPFAPEAVAKLKPRIRAICNELIDGFINEKGCDAAARYTRYIPTRAITIMLGVPEKDGD LFIKWIHEILEVGLNDDAAVMQAVREMVGYFAEQIEARKKHPTDDLIATLMNARSEDGQPLTDMHVQGALRLLLVAGIDT AWSAIGSSLWHLAQTPADRERLIAEPELIPTAIEEFLRAFAPATSGREVMKETTVSGCPMKPGNMVLLSFPAANRDPAVF PDADKIIIDRKENRHIAFGVGIHRCVGAHLARMEMLVAIEEWLKRIPEFRLDPSGGVKWSEGSVRGPRQLPLLLGKA
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44485; Mature: 44354
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPAPVTDWVHDFDHTDPRWTENPYPIWDDLRARCPIAHTNRFLGVYLPTTYEAVKEIS CCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHH RDTEHFSSRRVVVRNFRPEPPPPAPPITSDPPAHKHAKQILLPPFAPEAVAKLKPRIRAI HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH CNELIDGFINEKGCDAAARYTRYIPTRAITIMLGVPEKDGDLFIKWIHEILEVGLNDDAA HHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH VMQAVREMVGYFAEQIEARKKHPTDDLIATLMNARSEDGQPLTDMHVQGALRLLLVAGID HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCH TAWSAIGSSLWHLAQTPADRERLIAEPELIPTAIEEFLRAFAPATSGREVMKETTVSGCP HHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC MKPGNMVLLSFPAANRDPAVFPDADKIIIDRKENRHIAFGVGIHRCVGAHLARMEMLVAI CCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHH EEWLKRIPEFRLDPSGGVKWSEGSVRGPRQLPLLLGKA HHHHHHCCCCEECCCCCCEECCCCCCCCCCCCHHCCCC >Mature Secondary Structure SSPAPVTDWVHDFDHTDPRWTENPYPIWDDLRARCPIAHTNRFLGVYLPTTYEAVKEIS CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHH RDTEHFSSRRVVVRNFRPEPPPPAPPITSDPPAHKHAKQILLPPFAPEAVAKLKPRIRAI HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH CNELIDGFINEKGCDAAARYTRYIPTRAITIMLGVPEKDGDLFIKWIHEILEVGLNDDAA HHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH VMQAVREMVGYFAEQIEARKKHPTDDLIATLMNARSEDGQPLTDMHVQGALRLLLVAGID HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCH TAWSAIGSSLWHLAQTPADRERLIAEPELIPTAIEEFLRAFAPATSGREVMKETTVSGCP HHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC MKPGNMVLLSFPAANRDPAVFPDADKIIIDRKENRHIAFGVGIHRCVGAHLARMEMLVAI CCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHH EEWLKRIPEFRLDPSGGVKWSEGSVRGPRQLPLLLGKA HHHHHHCCCCEECCCCCCEECCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]