Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is surA [H]

Identifier: 75675872

GI number: 75675872

Start: 1833024

End: 1833968

Strand: Direct

Name: surA [H]

Synonym: Nwi_1680

Alternate gene names: 75675872

Gene position: 1833024-1833968 (Clockwise)

Preceding gene: 75675871

Following gene: 75675873

Centisome position: 53.88

GC content: 57.57

Gene sequence:

>945_bases
ATGAAAATGACCCTGCTCTACCGGCCATCCAGCCTCCTTGCCGTATTCGCATTTCTTACGTTCGTCAGCATGAACTCGCC
GCTGCATGCGCAGTCGATCGCGGTCATGGTCAACGGTGAGCCGATCACCACTTTGGATATCGAACAGCGCAGCCGCCTGA
TCAAGATATCCACTCACAAATCTCCGTCCCGGCAGGAGGTGATCGACGAGCTGATCGATGAGAAGGTGAAGGTCAAGGAG
GCCAAGAAGTACGGTGTGAATCCGACCTCGACGGACATTGATCGTGCCTACGCCAATATGGGCGCGCGGATGGGGATGTC
GCCCGAACAGCTGACGAAATCGCTCGGCTCCCAGGGGATTCGCCCGGATACGATTAAGTCGCGCCTGAAAGCCGATCTTG
TCTGGGGAAGCCTCGTGCGCGGCCGCTTCAAGGAAAGTCTTCTCGTGAGTGATCGGGACGTCAATGAAGCGCTGAAGAAC
AGCGGCGAGGATCAATCGAAGATTGAGGGGGTCGAGTACCAGATGCGCCCTGTCGTTCTGATCGTTCCGCGCGGTGCGAC
GGCTTCCATGGTGGAAGCGCGGCGCAACGAGGCCAATGCTTTGCGCGAGCGCGTGCAATCCTGTGCGGAGATCATTCGCA
CCGTCAAGGTGATGCGGAATGCCACCCTCCGCGAGACGATCACCAAAACGTCCACCGACCTGCCGCCTCCGCTTCGTGAT
CTGCTGGACAAGACGGCGGTGGGACATCTGACGCCGCCGGAAATGACCCGGCAGGGCGTCGAAATGGTGGCGGTATGCGG
AAAGAAGGTGACAAGCGTGGACACCCCGAAGAAAAAGGAAATCCGGGAGAAAATGTTCGCCGACAAATATGAGAAGCGAT
CCAAATCTTACCTGGAACGTATTCGAAAATCGGCGATGATCGAATATCGTGAGAGCCGCCCCTGA

Upstream 100 bases:

>100_bases
AAACGCTATAGGTTTCAAGTGGAGGTGCTTTTTGCAGCAAGACCGGGCTGCCTGATTTGACACAGCCTCCGTCGACAAAA
GATCTGCTAGCGCGACTGAC

Downstream 100 bases:

>100_bases
GAACGGCGTGCAAATGACGTTCTCGCGTCCCGCAGAAGTCTAAGGCGGCGGATGTCTTGAACGGCGGCACTGTCCGATCA
AAAGCCGCGCCGGAGTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE
AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN
SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD
LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP

Sequences:

>Translated_314_residues
MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE
AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN
SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD
LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP
>Mature_314_residues
MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDELIDEKVKVKE
AKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKN
SGEDQSKIEGVEYQMRPVVLIVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD
LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIEYRESRP

Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PpiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000297
- InterPro:   IPR023034
- InterPro:   IPR015391
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 35382; Mature: 35382

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHK
CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCEEEEECCC
SPSRQEVIDELIDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCEEEECCEEE
IVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLER
HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRKSAMIEYRESRP
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKMTLLYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHK
CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCEEEEECCC
SPSRQEVIDELIDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RPDTIKSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCCCEEEECCEEE
IVPRGATASMVEARRNEANALRERVQSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRD
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LLDKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLER
HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRKSAMIEYRESRP
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA