| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675858
Identifier: 75675858
GI number: 75675858
Start: 1813358
End: 1814005
Strand: Direct
Name: 75675858
Synonym: Nwi_1666
Alternate gene names: NA
Gene position: 1813358-1814005 (Clockwise)
Preceding gene: 75675850
Following gene: 75675860
Centisome position: 53.3
GC content: 59.88
Gene sequence:
>648_bases ATGCCTGAAGTCATTTTTACCGGTCCCGCCGGCCGTCTCGAAGGCCGCTACCATCCAGCGAAGCAGAAAAATGCCCCGAT AGCGATGGTCCTGCATCCGCACCCACAGTTTCGCGGCAGCATGAACCACCCGATTGTCTATCAGGTTTACTATGCTTTCG TGGCGCGGGGCTTTTCCGTGCTGCGTTTCAATTTCCGTGGCGTTGGCCGCAGCCAGGGCTCGTTCGACCACGGCACCGGC GAATTGTCGGACGCCGCGGCTGCGCTCGACTGGGCGCAGACCATCAACCCGGAGGCGCGCGCCTGCTGGGTCGCGGGATT TTCCTTTGGCGCCTGGATCGGAATGCAGTTGCTGATGCGGCGGCCCGAGGTGGAAGGCTTCATCTCGATCGCGCCTGAAC CCAACCGCTACGATTTCTCGTTCCTGGCGCCGTGCCCGTCATCGGGGCTTATCGTCCACGGCGAGAAGGATATCGTCGCG CCAGCCAAGGATGTCACGACGCTGGTCGAGAAGCTGAAGACCCAGAAGGGAATCGTGATCGATCAGCAAACCATTCCGGG TGCGAACCATTTCTTCGAGGACAAGATGGAACCGTTGATGGAAACGGTCACCAGCTATCTCGATATGAGGCTTGCCAACA TCCGGTAG
Upstream 100 bases:
>100_bases GCACTTTCTGTTACCGCCATCGCGGCGGCCTGATCGCCCTCGTCGTCGAGCCGCGAACGGAAACCGATCCTGTGAGCGGC TTGATTTGCCAAGGATTCCG
Downstream 100 bases:
>100_bases CCGCATCGCGTGTGGGACGCAATATCGTACGCCACAGCGTCGCGAATGGTTCAGGGCCGCGTGACCACACCGCCGGTCAT CGGCACCGGCACTCCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG ELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA PAKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR
Sequences:
>Translated_215_residues MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTG ELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVA PAKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR >Mature_214_residues PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSVLRFNFRGVGRSQGSFDHGTGE LSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMRRPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAP AKDVTTLVEKLKTQKGIVIDQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23909; Mature: 23778
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSV CCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMR EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVTTLVEKLKTQKGIVI CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE DQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEVIFTGPAGRLEGRYHPAKQKNAPIAMVLHPHPQFRGSMNHPIVYQVYYAFVARGFSV CCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE LRFNFRGVGRSQGSFDHGTGELSDAAAALDWAQTINPEARACWVAGFSFGAWIGMQLLMR EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH RPEVEGFISIAPEPNRYDFSFLAPCPSSGLIVHGEKDIVAPAKDVTTLVEKLKTQKGIVI CCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEE DQQTIPGANHFFEDKMEPLMETVTSYLDMRLANIR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]