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The map label for this gene is ybbJ [H]

Identifier: 75675123

GI number: 75675123

Start: 1018602

End: 1019048

Strand: Direct

Name: ybbJ [H]

Synonym: Nwi_0930

Alternate gene names: 75675123

Gene position: 1018602-1019048 (Clockwise)

Preceding gene: 75675122

Following gene: 75675125

Centisome position: 29.94

GC content: 67.11

Gene sequence:

>447_bases
ATGATCGACCTGTTGGCGTCGCTGGGAAACTGGAACTGGCTGATCCTGGGTCTCGTTCTGGTGGGTCTTGAACTGCTGAC
GCCGGGTGTCTTCCTGTTCTGGCTCGGACTGGCGGCATTTCTGGTCGGCGCGCTGTCGTTCGTGGTGGATCCGACGTGGC
AAACGCAACTCCTGATGTTTGCCGTGTTCGCGGCCGCTGCGGTGCCGTTATGGCGTCGGATGGCGCGTCGGGAGTCGAGC
GGCGCCGCCAGCCCGTTCCTCAACCGGCGCGCCGAAGCGTTGGTTGGCCGCGTGTTCACGCTGGAGAGGCCGATCGTGGA
CGGGACGGGCACGGTGCGGATCGACGACACGATCTGGCGGGTCGCGGGACCGGATGCGCCAGCGGGGAGCCGGGTGAAAG
TCGTGAAGGCGGACGGCGCGAGCCTCACCGTGGCCACGGAGCCGTAG

Upstream 100 bases:

>100_bases
CAGCTTCTGCCGCGCGACGGGGAGCGGTGCCGAATGCCGGTTCAAAGGTGCCGCCGCCGGTGCCGCCGCAGGGATAGATC
ATCGGGCGAGGGAGGGTTTT

Downstream 100 bases:

>100_bases
CAGGCTTGAACGCCGGTCAGGCCACGCCCGCGCGCAGCAGGTCGTGCAGATGCACGATGCCGACCGGCTTTTTCCCCTCG
GTCACGATCAGCGCCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIDLLASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGALSFVVDPTWQTQLLMFAVFAAAAVPLWRRMARRESS
GAASPFLNRRAEALVGRVFTLERPIVDGTGTVRIDDTIWRVAGPDAPAGSRVKVVKADGASLTVATEP

Sequences:

>Translated_148_residues
MIDLLASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGALSFVVDPTWQTQLLMFAVFAAAAVPLWRRMARRESS
GAASPFLNRRAEALVGRVFTLERPIVDGTGTVRIDDTIWRVAGPDAPAGSRVKVVKADGASLTVATEP
>Mature_148_residues
MIDLLASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGALSFVVDPTWQTQLLMFAVFAAAAVPLWRRMARRESS
GAASPFLNRRAEALVGRVFTLERPIVDGTGTVRIDDTIWRVAGPDAPAGSRVKVVKADGASLTVATEP

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=124, Percent_Identity=35.4838709677419, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 15931; Mature: 15931

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLLASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGALSFVVDPTWQTQLLMF
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AVFAAAAVPLWRRMARRESSGAASPFLNRRAEALVGRVFTLERPIVDGTGTVRIDDTIWR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
VAGPDAPAGSRVKVVKADGASLTVATEP
ECCCCCCCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MIDLLASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGALSFVVDPTWQTQLLMF
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AVFAAAAVPLWRRMARRESSGAASPFLNRRAEALVGRVFTLERPIVDGTGTVRIDDTIWR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEE
VAGPDAPAGSRVKVVKADGASLTVATEP
ECCCCCCCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]