| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675125
Identifier: 75675125
GI number: 75675125
Start: 1020371
End: 1022062
Strand: Direct
Name: 75675125
Synonym: Nwi_0932
Alternate gene names: NA
Gene position: 1020371-1022062 (Clockwise)
Preceding gene: 75675123
Following gene: 75675129
Centisome position: 29.99
GC content: 64.3
Gene sequence:
>1692_bases GTGTCTTCCGGTCCAGCGACGGGCTTTTGCCGGAGCGTACCGATCTGGCGCGCGGTTTTGGCGTGCCTCGCTTTCATCGG TCCGGGATGCGCGACTGCCGGGGCGCAGACGCTGAGCGGCGACCAGATCACGCCGCTTCGGGGCGGACTGTTTCAGCCGC GGGAGTCTTCCTTGCGCCGGTCTGGTGAGCCCGCTGGCGATGTGGCGTCGGTATCCTCCACCATGGCTCCCTCCCGCATC GGCAGGACTCCCACCTACGACATCCCGGCCGCGACCGGCGCGGCCGACACGGGGTATGATTCGCTCAATCGCCGGCGCAA GGAGAAGAAACTTTATCCCGGCGCGCCGAAACCGAAGCAGCCGCCGGGGCCGGGCAACTTCGTCCCCGTTCCACCGCCCC CGCCGCTATCGGTCCCGCCGTCATCGACCGCCCATACGACGCCGATTGCTCCGGCGATGGCCGGAAGGGTCGAGGGGCAG CCAGCGCGCCGCCGCCTGAAGCGCGATGACGATCCGTTCGGCGCCGCGGGCAATTATGTCGGCAGTTTTTTCGTGAAGTC CGCGGTGGAGTTGTGGGGCGGCTACAATACCAATCCCGGTCGATTCAATCAGCCGAAGGGATCGGCGTTCTATATGGTCG CGCCGGAATTCGTGGCGGCGTCGGATTGGACGCGGCACTCCCTCCTCGTCGATCTGCGCGGATCGTTCACCGGTTTCGAC AGAACCTTTCCGCTGGGGGCAGATAATCCGCCTCAGTCGGTCATCTCGGTGCCGACGGTGGTGGATCGGCCTGATTTCCT CGGCAGGGCAGTTGGACGTCTCGACGTCAGGCGCGATACCCGCATCAATTCGGAACTGCGGATGCGGATCGGCATCGACA ACCCCGGCAGCCCGAACGTCCAGGCCGGTCTCGCCAGGTATCCGATCTTCGCTGTAACCGGCGGGACGGCCGGCATCGAA CACGACATCAACCGGCTGCAGGTTTCGCTGCATGGATTCGCGGACCGCACCATGTATCAGAACTCGCTACTGACGGATGG CACATCGGCGTCCAATGCGGACCGCAACTTCAACCAATACGGCGCCGTGGGGCGCGTCAGCTACGATCTTCTGCCCGGCT TCAAGCCCTTTGGCGAAGTCGAGGCGGACGCGCGCAACCGCGACACGCGGGTCGATCGCGATGGCTTTCAACGCGACTCC CATGGCGGCTATGCGAAGGTCGGGACCAGCTTTGAACTGACACGCTTGCTGATCGGTGAAGCCTCTATCGGCTATACCGC CCGCAACTATGCGGACCCGCGTCTCGACCAGTTGACCGGCCTGCTCACCAGCGGGTCGCTGATCTGGTCGGCGTCGGCGC TGACCACGGCGAGATTCACCTCGGTGACTTTCGTCGATGAATCCTTTGTGCCCGGTGTCGCCGGCGTGCTGACCCGTTCC CACACCATCGAGATCGATCACGATTTTCGCCGCTGGCTGACGGGGATCGGCAGGTTCACCTACGCGACGCAGGAGTATCG GGGCTCGGAACGCTCCGACCAGATCTACTCGATCTCCGGCGATCTCATTTACAGGCTGAACCGGGAATTCCAGATCAAGG CGCAGGTGCGCCACGATGTGCTGAGTACGAATATTCCGGGCGCAAACTCGGCGGCGACCGTGGTGATGCTCGGCGTCCGG CTGCAACGCTAA
Upstream 100 bases:
>100_bases AACGGCCCGTTAACCATAATTGTTTTAACTCCATTAACGATGGCGCACCCGCGTCGGGCGGGTACCACAAGTGTATATTT TTCTTGGAGTTTTCGGGATC
Downstream 100 bases:
>100_bases AAAATCTGCCTTGGCGTTTGTCTTGGCGTTCTTTTGGCGTTTCTTTTGGCGATTGAGCAACGACGCCTATTTCATCACCT CGCAAACCGTCGAATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSSGPATGFCRSVPIWRAVLACLAFIGPGCATAGAQTLSGDQITPLRGGLFQPRESSLRRSGEPAGDVASVSSTMAPSRI GRTPTYDIPAATGAADTGYDSLNRRRKEKKLYPGAPKPKQPPGPGNFVPVPPPPPLSVPPSSTAHTTPIAPAMAGRVEGQ PARRRLKRDDDPFGAAGNYVGSFFVKSAVELWGGYNTNPGRFNQPKGSAFYMVAPEFVAASDWTRHSLLVDLRGSFTGFD RTFPLGADNPPQSVISVPTVVDRPDFLGRAVGRLDVRRDTRINSELRMRIGIDNPGSPNVQAGLARYPIFAVTGGTAGIE HDINRLQVSLHGFADRTMYQNSLLTDGTSASNADRNFNQYGAVGRVSYDLLPGFKPFGEVEADARNRDTRVDRDGFQRDS HGGYAKVGTSFELTRLLIGEASIGYTARNYADPRLDQLTGLLTSGSLIWSASALTTARFTSVTFVDESFVPGVAGVLTRS HTIEIDHDFRRWLTGIGRFTYATQEYRGSERSDQIYSISGDLIYRLNREFQIKAQVRHDVLSTNIPGANSAATVVMLGVR LQR
Sequences:
>Translated_563_residues MSSGPATGFCRSVPIWRAVLACLAFIGPGCATAGAQTLSGDQITPLRGGLFQPRESSLRRSGEPAGDVASVSSTMAPSRI GRTPTYDIPAATGAADTGYDSLNRRRKEKKLYPGAPKPKQPPGPGNFVPVPPPPPLSVPPSSTAHTTPIAPAMAGRVEGQ PARRRLKRDDDPFGAAGNYVGSFFVKSAVELWGGYNTNPGRFNQPKGSAFYMVAPEFVAASDWTRHSLLVDLRGSFTGFD RTFPLGADNPPQSVISVPTVVDRPDFLGRAVGRLDVRRDTRINSELRMRIGIDNPGSPNVQAGLARYPIFAVTGGTAGIE HDINRLQVSLHGFADRTMYQNSLLTDGTSASNADRNFNQYGAVGRVSYDLLPGFKPFGEVEADARNRDTRVDRDGFQRDS HGGYAKVGTSFELTRLLIGEASIGYTARNYADPRLDQLTGLLTSGSLIWSASALTTARFTSVTFVDESFVPGVAGVLTRS HTIEIDHDFRRWLTGIGRFTYATQEYRGSERSDQIYSISGDLIYRLNREFQIKAQVRHDVLSTNIPGANSAATVVMLGVR LQR >Mature_562_residues SSGPATGFCRSVPIWRAVLACLAFIGPGCATAGAQTLSGDQITPLRGGLFQPRESSLRRSGEPAGDVASVSSTMAPSRIG RTPTYDIPAATGAADTGYDSLNRRRKEKKLYPGAPKPKQPPGPGNFVPVPPPPPLSVPPSSTAHTTPIAPAMAGRVEGQP ARRRLKRDDDPFGAAGNYVGSFFVKSAVELWGGYNTNPGRFNQPKGSAFYMVAPEFVAASDWTRHSLLVDLRGSFTGFDR TFPLGADNPPQSVISVPTVVDRPDFLGRAVGRLDVRRDTRINSELRMRIGIDNPGSPNVQAGLARYPIFAVTGGTAGIEH DINRLQVSLHGFADRTMYQNSLLTDGTSASNADRNFNQYGAVGRVSYDLLPGFKPFGEVEADARNRDTRVDRDGFQRDSH GGYAKVGTSFELTRLLIGEASIGYTARNYADPRLDQLTGLLTSGSLIWSASALTTARFTSVTFVDESFVPGVAGVLTRSH TIEIDHDFRRWLTGIGRFTYATQEYRGSERSDQIYSISGDLIYRLNREFQIKAQVRHDVLSTNIPGANSAATVVMLGVRL QR
Specific function: Unknown
COG id: COG5338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60875; Mature: 60744
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGPATGFCRSVPIWRAVLACLAFIGPGCATAGAQTLSGDQITPLRGGLFQPRESSLRR CCCCCCCCCHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH SGEPAGDVASVSSTMAPSRIGRTPTYDIPAATGAADTGYDSLNRRRKEKKLYPGAPKPKQ CCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PPGPGNFVPVPPPPPLSVPPSSTAHTTPIAPAMAGRVEGQPARRRLKRDDDPFGAAGNYV CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHH GSFFVKSAVELWGGYNTNPGRFNQPKGSAFYMVAPEFVAASDWTRHSLLVDLRGSFTGFD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEEECCCCCCCC RTFPLGADNPPQSVISVPTVVDRPDFLGRAVGRLDVRRDTRINSELRMRIGIDNPGSPNV CCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCH QAGLARYPIFAVTGGTAGIEHDINRLQVSLHGFADRTMYQNSLLTDGTSASNADRNFNQY HHHHHHCCEEEEECCCCCHHHCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHH GAVGRVSYDLLPGFKPFGEVEADARNRDTRVDRDGFQRDSHGGYAKVGTSFELTRLLIGE CCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHCC ASIGYTARNYADPRLDQLTGLLTSGSLIWSASALTTARFTSVTFVDESFVPGVAGVLTRS CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHEEEEEEECCCCCCCHHHHHCCC HTIEIDHDFRRWLTGIGRFTYATQEYRGSERSDQIYSISGDLIYRLNREFQIKAQVRHDV EEEEECHHHHHHHHHHHHHHEEHHHHCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHH LSTNIPGANSAATVVMLGVRLQR HHCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure SSGPATGFCRSVPIWRAVLACLAFIGPGCATAGAQTLSGDQITPLRGGLFQPRESSLRR CCCCCCCCHHCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH SGEPAGDVASVSSTMAPSRIGRTPTYDIPAATGAADTGYDSLNRRRKEKKLYPGAPKPKQ CCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PPGPGNFVPVPPPPPLSVPPSSTAHTTPIAPAMAGRVEGQPARRRLKRDDDPFGAAGNYV CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCHHHH GSFFVKSAVELWGGYNTNPGRFNQPKGSAFYMVAPEFVAASDWTRHSLLVDLRGSFTGFD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCEEEEEECCCCCCCC RTFPLGADNPPQSVISVPTVVDRPDFLGRAVGRLDVRRDTRINSELRMRIGIDNPGSPNV CCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCH QAGLARYPIFAVTGGTAGIEHDINRLQVSLHGFADRTMYQNSLLTDGTSASNADRNFNQY HHHHHHCCEEEEECCCCCHHHCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHH GAVGRVSYDLLPGFKPFGEVEADARNRDTRVDRDGFQRDSHGGYAKVGTSFELTRLLIGE CCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHCC ASIGYTARNYADPRLDQLTGLLTSGSLIWSASALTTARFTSVTFVDESFVPGVAGVLTRS CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHEEEEEEECCCCCCCHHHHHCCC HTIEIDHDFRRWLTGIGRFTYATQEYRGSERSDQIYSISGDLIYRLNREFQIKAQVRHDV EEEEECHHHHHHHHHHHHHHEEHHHHCCCCCCCEEEEECCCEEEEECCCEEEEHHHHHHH LSTNIPGANSAATVVMLGVRLQR HHCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA