| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is qmcA [H]
Identifier: 75675122
GI number: 75675122
Start: 1017580
End: 1018578
Strand: Direct
Name: qmcA [H]
Synonym: Nwi_0929
Alternate gene names: 75675122
Gene position: 1017580-1018578 (Clockwise)
Preceding gene: 75675121
Following gene: 75675123
Centisome position: 29.91
GC content: 62.26
Gene sequence:
>999_bases ATGACCGGGTTCGATATTTTTGCGATTGCTGTTGTGGGACTCGTGATCCTGACGCTGCTGGCCGGCGTCAAGACCGTGCC GCAAGGCCACGACTGGACCATCGAACGGTTTGGCAAGTACACGCGAACGCTCGGTCCTGGCCTCAATCTCATCATTCCCT ATATCGACCGCGTCGGCCGCAAGATGAACATGATGGAGCAGGTGATCGAAATTCCCCAGCAGGAGGTCATCACCAAGGAC AACGCGACTGTCACGGTGGACGGCGTCGCCTTCTATCAGGTGTTCGATGCGGCCAAGGCGAGCTACGAGGTGGCGAACCT CACCCAATCCATCGTGACCCTGACAATGACCAATATCCGTTCGGTCATGGGCTCGATGGACCTCGACCAGGTGCTGTCGC ATCGTGACGAAATCAACGAGCGGCTGCTTCGCGTCGTGGACGCCGCGGTGACTCCGTGGGGTTTGAAGGTCAACCGTATC GAGATCAAGGACATCGTGCCGCCTGCCGACCTCGTGCAGGCGATGGGCCGCCAGATGAAGGCCGAGCGCGAAAAACGCGC CGACATCCTTCAGGCCGAAGGCCAGCGCCAGTCGGCCATTCTTAAGGCCGAGGGCCAGAAGCAGTCGCAGATTCTCGAAG CCGAAGGCCGAAAGGAGGCCGCTTTCCGTGATGCCGAGGCGCGCGAACGGTCAGCGGAAGCCGAGGCCGAGGCGACGCGC ATGGTGAGCGAGGCGATCGCGAAGGGCGATGTGGCGTCCCTCAACTACTTTATTGCTGACAAGTACATCAAGGCGTTCGG GCAGCTCGCAAACTCGCCGAACCAGAAGGTCGTGATGCTGCCGATGGAGGCCACCAGCATGCTGGCGTCGCTGGCGGGCA TCGGCGAGATCGCCAAAGCCACCTTCGGCGACAGCACGGCGCCAGCTTCTGCCGCGCGACGGGGAGCGGTGCCGAATGCC GGTTCAAAGGTGCCGCCGCCGGTGCCGCCGCAGGGATAG
Upstream 100 bases:
>100_bases TTCCGGTGGCGACTAACCGGCAGTTCACAATCTTGCATTATGCGGATGGCGGCGAGCGCATGGCGTTCCTGAAGGGATGG CGCCTCGCAGGGAGAGTTTT
Downstream 100 bases:
>100_bases ATCATCGGGCGAGGGAGGGTTTTATGATCGACCTGTTGGCGTCGCTGGGAAACTGGAACTGGCTGATCCTGGGTCTCGTT CTGGTGGGTCTTGAACTGCT
Product: Band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTGFDIFAIAVVGLVILTLLAGVKTVPQGHDWTIERFGKYTRTLGPGLNLIIPYIDRVGRKMNMMEQVIEIPQQEVITKD NATVTVDGVAFYQVFDAAKASYEVANLTQSIVTLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVTPWGLKVNRI EIKDIVPPADLVQAMGRQMKAEREKRADILQAEGQRQSAILKAEGQKQSQILEAEGRKEAAFRDAEARERSAEAEAEATR MVSEAIAKGDVASLNYFIADKYIKAFGQLANSPNQKVVMLPMEATSMLASLAGIGEIAKATFGDSTAPASAARRGAVPNA GSKVPPPVPPQG
Sequences:
>Translated_332_residues MTGFDIFAIAVVGLVILTLLAGVKTVPQGHDWTIERFGKYTRTLGPGLNLIIPYIDRVGRKMNMMEQVIEIPQQEVITKD NATVTVDGVAFYQVFDAAKASYEVANLTQSIVTLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVTPWGLKVNRI EIKDIVPPADLVQAMGRQMKAEREKRADILQAEGQRQSAILKAEGQKQSQILEAEGRKEAAFRDAEARERSAEAEAEATR MVSEAIAKGDVASLNYFIADKYIKAFGQLANSPNQKVVMLPMEATSMLASLAGIGEIAKATFGDSTAPASAARRGAVPNA GSKVPPPVPPQG >Mature_331_residues TGFDIFAIAVVGLVILTLLAGVKTVPQGHDWTIERFGKYTRTLGPGLNLIIPYIDRVGRKMNMMEQVIEIPQQEVITKDN ATVTVDGVAFYQVFDAAKASYEVANLTQSIVTLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVTPWGLKVNRIE IKDIVPPADLVQAMGRQMKAEREKRADILQAEGQRQSAILKAEGQKQSQILEAEGRKEAAFRDAEARERSAEAEAEATRM VSEAIAKGDVASLNYFIADKYIKAFGQLANSPNQKVVMLPMEATSMLASLAGIGEIAKATFGDSTAPASAARRGAVPNAG SKVPPPVPPQG
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=285, Percent_Identity=37.1929824561403, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI21686995, Length=204, Percent_Identity=31.8627450980392, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI221316744, Length=204, Percent_Identity=31.8627450980392, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI38016911, Length=199, Percent_Identity=35.1758793969849, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI7657615, Length=190, Percent_Identity=25.7894736842105, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1786697, Length=303, Percent_Identity=61.056105610561, Blast_Score=402, Evalue=1e-113, Organism=Caenorhabditis elegans, GI32564147, Length=267, Percent_Identity=39.3258426966292, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17569493, Length=224, Percent_Identity=29.9107142857143, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI193209764, Length=224, Percent_Identity=29.9107142857143, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI25153583, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71987612, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987621, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17569497, Length=201, Percent_Identity=29.3532338308458, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17570459, Length=201, Percent_Identity=31.8407960199005, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17569499, Length=182, Percent_Identity=33.5164835164835, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=33.125, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71989948, Length=160, Percent_Identity=33.125, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32566490, Length=193, Percent_Identity=30.5699481865285, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193210507, Length=202, Percent_Identity=29.2079207920792, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17570161, Length=202, Percent_Identity=29.2079207920792, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI45550506, Length=266, Percent_Identity=36.4661654135338, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI18860517, Length=155, Percent_Identity=36.7741935483871, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI45556022, Length=155, Percent_Identity=37.4193548387097, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI281361633, Length=200, Percent_Identity=30, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI281361631, Length=200, Percent_Identity=30, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24657857, Length=194, Percent_Identity=36.0824742268041, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI62484448, Length=194, Percent_Identity=36.0824742268041, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI21356845, Length=191, Percent_Identity=27.2251308900524, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI281365664, Length=194, Percent_Identity=36.0824742268041, Blast_Score=101, Evalue=8e-22, Organism=Drosophila melanogaster, GI62484274, Length=194, Percent_Identity=36.0824742268041, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573263, Length=202, Percent_Identity=27.7227722772277, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI281361635, Length=132, Percent_Identity=28.7878787878788, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 35993; Mature: 35862
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFDIFAIAVVGLVILTLLAGVKTVPQGHDWTIERFGKYTRTLGPGLNLIIPYIDRVGR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH KMNMMEQVIEIPQQEVITKDNATVTVDGVAFYQVFDAAKASYEVANLTQSIVTLTMTNIR HHHHHHHHHHCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVMGSMDLDQVLSHRDEINERLLRVVDAAVTPWGLKVNRIEIKDIVPPADLVQAMGRQMK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHH AEREKRADILQAEGQRQSAILKAEGQKQSQILEAEGRKEAAFRDAEARERSAEAEAEATR HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MVSEAIAKGDVASLNYFIADKYIKAFGQLANSPNQKVVMLPMEATSMLASLAGIGEIAKA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH TFGDSTAPASAARRGAVPNAGSKVPPPVPPQG HCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGFDIFAIAVVGLVILTLLAGVKTVPQGHDWTIERFGKYTRTLGPGLNLIIPYIDRVGR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH KMNMMEQVIEIPQQEVITKDNATVTVDGVAFYQVFDAAKASYEVANLTQSIVTLTMTNIR HHHHHHHHHHCCHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVMGSMDLDQVLSHRDEINERLLRVVDAAVTPWGLKVNRIEIKDIVPPADLVQAMGRQMK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHH AEREKRADILQAEGQRQSAILKAEGQKQSQILEAEGRKEAAFRDAEARERSAEAEAEATR HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MVSEAIAKGDVASLNYFIADKYIKAFGQLANSPNQKVVMLPMEATSMLASLAGIGEIAKA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH TFGDSTAPASAARRGAVPNAGSKVPPPVPPQG HCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]