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The map label for this gene is ybiX [C]

Identifier: 75674898

GI number: 75674898

Start: 783183

End: 783863

Strand: Direct

Name: ybiX [C]

Synonym: Nwi_0701

Alternate gene names: 75674898

Gene position: 783183-783863 (Clockwise)

Preceding gene: 75674897

Following gene: 75674899

Centisome position: 23.02

GC content: 64.02

Gene sequence:

>681_bases
ATGATCCAGGTTATTTCGGACGTGCTGACTCCGGACGAGCTGAAACGTTTCCGCGAGTTGCTCGGGCAGGCGCAATGGCA
GGACGGCCGCGCCACCGCGGGCCATGTCGCGGTCCGCGCCAAGGCCAATGAGCAGTTGTCGCACGAGGATTCGCTGGGGC
AGCAGTTGTCCGAGTTTCTGCTGGAGCGCCTCGGCAAGATCAGCCATTTTATCGCCGCGGCGCTGCCGCTGAAGGTACTG
CCGCCACGTTTCAACCGCTACACCGGCGGCGGCAGCTACGGTGATCACATCGACAACGCGATCTTTTCCGTGCCGGGCGC
CGGCGTGCGTATCCGCGGTGACCTTTCCGCCACGTTGTTCCTCAGCGAACCCGGCGATTATGACGGCGGTGAACTGATTA
TCCAGGGCGAGTTCGCCCGGCACCAGTTCAAGCTGCCCGCGGGACAGATGATCCTCTATCCTGCCAGCACCTTTCATCAG
GTTACTCCGGTCACCCGGGGCGCGCGGCTCGCGGCGTTCTTCTGGACGCAGAGCCTGGTGCGCGAACACTCGCGCCGCGC
GCTGCTGTTCGAACTCGACAATACCATTCAGGCGCTGGCGCAGGACAATCCCGAGCAGCCGGCGGTCGCCCGCCTGACGG
GGCTCTATCACAACCTGTTGCGCGAATGGAGCGAGACCTGA

Upstream 100 bases:

>100_bases
GAAAACCGCTACACATTTTTCCTCATCCCGCTTGAGTGCTTTTCAGCTTCAATCAGAAGGGTAAGACGGGGGCGAGGCTG
CCGCGAAAAGGATACAGGCG

Downstream 100 bases:

>100_bases
GCATTTTCCGGCGAAGTGGATACCAGTTCGCCGCAAGAAAATGTGAGCAGAGAATAATTTCCAGAGCATGGCCGATTCAA
CCTGAAGGGATCATGCTCTG

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIQVISDVLTPDELKRFRELLGQAQWQDGRATAGHVAVRAKANEQLSHEDSLGQQLSEFLLERLGKISHFIAAALPLKVL
PPRFNRYTGGGSYGDHIDNAIFSVPGAGVRIRGDLSATLFLSEPGDYDGGELIIQGEFARHQFKLPAGQMILYPASTFHQ
VTPVTRGARLAAFFWTQSLVREHSRRALLFELDNTIQALAQDNPEQPAVARLTGLYHNLLREWSET

Sequences:

>Translated_226_residues
MIQVISDVLTPDELKRFRELLGQAQWQDGRATAGHVAVRAKANEQLSHEDSLGQQLSEFLLERLGKISHFIAAALPLKVL
PPRFNRYTGGGSYGDHIDNAIFSVPGAGVRIRGDLSATLFLSEPGDYDGGELIIQGEFARHQFKLPAGQMILYPASTFHQ
VTPVTRGARLAAFFWTQSLVREHSRRALLFELDNTIQALAQDNPEQPAVARLTGLYHNLLREWSET
>Mature_226_residues
MIQVISDVLTPDELKRFRELLGQAQWQDGRATAGHVAVRAKANEQLSHEDSLGQQLSEFLLERLGKISHFIAAALPLKVL
PPRFNRYTGGGSYGDHIDNAIFSVPGAGVRIRGDLSATLFLSEPGDYDGGELIIQGEFARHQFKLPAGQMILYPASTFHQ
VTPVTRGARLAAFFWTQSLVREHSRRALLFELDNTIQALAQDNPEQPAVARLTGLYHNLLREWSET

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=225, Percent_Identity=48.8888888888889, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y701_NITWN (Q3SUS4)

Other databases:

- EMBL:   CP000115
- RefSeq:   YP_317319.1
- ProteinModelPortal:   Q3SUS4
- SMR:   Q3SUS4
- STRING:   Q3SUS4
- GeneID:   3674947
- GenomeReviews:   CP000115_GR
- KEGG:   nwi:Nwi_0701
- NMPDR:   fig|323098.3.peg.393
- eggNOG:   COG3128
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- PhylomeDB:   Q3SUS4
- ProtClustDB:   PRK05467
- BioCyc:   NWIN323098:NWI_0701-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25143; Mature: 25143

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVISDVLTPDELKRFRELLGQAQWQDGRATAGHVAVRAKANEQLSHEDSLGQQLSEFL
CCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHHHHHHHHH
LERLGKISHFIAAALPLKVLPPRFNRYTGGGSYGDHIDNAIFSVPGAGVRIRGDLSATLF
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEEEEE
LSEPGDYDGGELIIQGEFARHQFKLPAGQMILYPASTFHQVTPVTRGARLAAFFWTQSLV
EECCCCCCCCEEEEEECHHHHEECCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHH
REHSRRALLFELDNTIQALAQDNPEQPAVARLTGLYHNLLREWSET
HHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQVISDVLTPDELKRFRELLGQAQWQDGRATAGHVAVRAKANEQLSHEDSLGQQLSEFL
CCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHHHHHHHHH
LERLGKISHFIAAALPLKVLPPRFNRYTGGGSYGDHIDNAIFSVPGAGVRIRGDLSATLF
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEEEEE
LSEPGDYDGGELIIQGEFARHQFKLPAGQMILYPASTFHQVTPVTRGARLAAFFWTQSLV
EECCCCCCCCEEEEEECHHHHEECCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHH
REHSRRALLFELDNTIQALAQDNPEQPAVARLTGLYHNLLREWSET
HHHHCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA