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The map label for this gene is fecI [C]

Identifier: 75674853

GI number: 75674853

Start: 736051

End: 736506

Strand: Direct

Name: fecI [C]

Synonym: Nwi_0656

Alternate gene names: 75674853

Gene position: 736051-736506 (Clockwise)

Preceding gene: 75674850

Following gene: 75674854

Centisome position: 21.64

GC content: 63.6

Gene sequence:

>456_bases
ATGCGGATCGTGCGCGATCCCCAGACGGCCGAGGATCTTGCGCAGGAGACGTACCTCCGTGCCGCGCGGGCTGCCGAGAG
CGGCCCGATCGAACATCTGGAAGCTTTTCTGTATCAGACGGCTCGCAACCTCGCGCTCGACCATCTGCGACGACAGCGGA
CGCGAGGCAGTGTGCAGCTTGATGGTCTCCCCACCGCGGAAATCGAGAAAGTCCCGGCGAATTCTCCGACACCGGAAGGC
GTGGTCATCGAGCGCGAGCGGTTGAACCGATTCTGGCAGGCTTTGAGCGCGCTTCCGGAACGGGCGCAAACCGTCGTCGT
GCTCAGCCGCGTCGAAGGGTGGCAGAACGGACAGATCGCCAGTCATCTCGGCGTTTCCGAGCGCACGGTCTTCAACGACC
TCAAGCTGGCGATGGCGCATTGCCGCGACGCGATCCGACGTCTTGATGAGGGTTGA

Upstream 100 bases:

>100_bases
ATGAGCCCGCTTCCGTGTCGTGATTCAGAAGAGGGCACGGATGGCTGAGTCCTTGAGTGCTGCCTTCCTGCTGCATCGGC
GATCCCTGATGTGGAGCGTG

Downstream 100 bases:

>100_bases
GACCTTCTCTTGACCGCCAGCCGGATTTCTCCTCCCGAACCACATGGGTCGGCCGCCGGTCCCGACTGATTTTGCCGGAT
TCCAGTCGACCGAACGTCTC

Product: sigma-70 region 2

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor FecI; Fec I Like Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma Factor SigE; RNA Polymerase Sigma-70 Family Protein; RNA Polymerase Sigma-24 Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Family Sigma Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; RNA Polymerase ECF-Subfamily Sigma-70 Factor; AlteRNAtive RNA Polymerase Sigma Factor SigE; Ferric Regulator Sigma-24 Subunit; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-70 Factor FecI; ECF Sigma Factor; Extracytoplasmic-Function Sigma-70 Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Anti-FecI Sigma Factor FecR; FecI-Like Protein; RNA Polymerase Sigma Factor FecI Family

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRIVRDPQTAEDLAQETYLRAARAAESGPIEHLEAFLYQTARNLALDHLRRQRTRGSVQLDGLPTAEIEKVPANSPTPEG
VVIERERLNRFWQALSALPERAQTVVVLSRVEGWQNGQIASHLGVSERTVFNDLKLAMAHCRDAIRRLDEG

Sequences:

>Translated_151_residues
MRIVRDPQTAEDLAQETYLRAARAAESGPIEHLEAFLYQTARNLALDHLRRQRTRGSVQLDGLPTAEIEKVPANSPTPEG
VVIERERLNRFWQALSALPERAQTVVVLSRVEGWQNGQIASHLGVSERTVFNDLKLAMAHCRDAIRRLDEG
>Mature_151_residues
MRIVRDPQTAEDLAQETYLRAARAAESGPIEHLEAFLYQTARNLALDHLRRQRTRGSVQLDGLPTAEIEKVPANSPTPEG
VVIERERLNRFWQALSALPERAQTVVVLSRVEGWQNGQIASHLGVSERTVFNDLKLAMAHCRDAIRRLDEG

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17004; Mature: 17004

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVRDPQTAEDLAQETYLRAARAAESGPIEHLEAFLYQTARNLALDHLRRQRTRGSVQL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
DGLPTAEIEKVPANSPTPEGVVIERERLNRFWQALSALPERAQTVVVLSRVEGWQNGQIA
CCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SHLGVSERTVFNDLKLAMAHCRDAIRRLDEG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIVRDPQTAEDLAQETYLRAARAAESGPIEHLEAFLYQTARNLALDHLRRQRTRGSVQL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
DGLPTAEIEKVPANSPTPEGVVIERERLNRFWQALSALPERAQTVVVLSRVEGWQNGQIA
CCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SHLGVSERTVFNDLKLAMAHCRDAIRRLDEG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA