| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fecR [H]
Identifier: 75674854
GI number: 75674854
Start: 736647
End: 737660
Strand: Direct
Name: fecR [H]
Synonym: Nwi_0657
Alternate gene names: 75674854
Gene position: 736647-737660 (Clockwise)
Preceding gene: 75674853
Following gene: 75674855
Centisome position: 21.65
GC content: 63.31
Gene sequence:
>1014_bases GTGGCACACGACGGCGCAGAGGACGACAAATCCGGAGGGGCGTTTACCCATCCGGACCCGATTGTCGATGAAGCGCTTGA ATGGCTCGCCCGCCGTCAGAACGCGCCGCTGGAGCTGGCGGAACAACGGCAATTTCAGGAATGGCTGCTGCGAAGCCCAC GCCACGGCGAAGAGTTTCGTTATCTCGAGGCGATGTGGAGATCCCCTGAACTCGGGAAAGCGGCTGAAGGGCTGCCAGCC GCCGCGCGCGGTTCGGTGAACCGACGCCGGCTGCTCTCGGCCGCGCGCTACGTTCAATCGTGGTCACTGCGGGGCGTCGC CGCCGCCGCCATCCTCATGATCGCCATCGGGGCGTGGCAATATCCGGCTCTGATGTTGCGGTGGCAAGCCGATTACATCA CGGCAACCGGCGGCCGGGCGCAAGTGTCGTTGCCGGACGGCTCGACGATGCTTTTGAACACCGCTTCGGCCGTGTCGATC GACTTCACGAACGGACGGCGACAAGTGACCCTTCTGGAAGGCGAAGCCTTCTTCGATGTACGGCACGATCCGGCGCATCC GTTCCGCGTTGCCGCTCACTATGGGGAAACCGAGGTGAAGGGTACGGCCTTTGCCGTCAGGACTGAAAGTGATCAGGACA CCATTGTTCTTGAGCGCGGCCGCGTCGAGGTCAGCCGGTTGTCGGATTCCGGCGATCATGTCGAACTCGATCCCGGAGAG ATGGTGACAGCCACCGCGAAAGCTCTCTCCGTGGTTGCCAGGCGTGACCCGTCGGAGATTCTCGCCTGGCGCGATGGCCG CATCATATTCGAGAATCAACGCCTGGCGCACGTGCTGGATGAACTGCGCCGCTATTACGACGGGATCGTCATTGTCGCCG ACGCGCGGGTGGGTGATCTCGTCGTCACCGGCAACTATCGGCTTGATGACGTGCCCGGCGCCATCCGCACGCTTGCCGAT GCGGCGGGCGCAACCATGAACCGTCTGCCCGGCGGAATCATTCTGCTGCGATAG
Upstream 100 bases:
>100_bases CACATGGGTCGGCCGCCGGTCCCGACTGATTTTGCCGGATTCCAGTCGACCGAACGTCTCTGGTATAAGGCTGCGGCATA GCGAAGACAGGATGGTCTGA
Downstream 100 bases:
>100_bases CACCGGGTTTTTTTGCCGGATCGCCTCTTGTCGAACGTCATCTGTTCGAGGGCGAGGCGCGCACGCAGCGCGGGACCGAC CCTCGATTGAATCAGAGGGC
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAHDGAEDDKSGGAFTHPDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFRYLEAMWRSPELGKAAEGLPA AARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQYPALMLRWQADYITATGGRAQVSLPDGSTMLLNTASAVSI DFTNGRRQVTLLEGEAFFDVRHDPAHPFRVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGE MVTATAKALSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRLDDVPGAIRTLAD AAGATMNRLPGGIILLR
Sequences:
>Translated_337_residues MAHDGAEDDKSGGAFTHPDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFRYLEAMWRSPELGKAAEGLPA AARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQYPALMLRWQADYITATGGRAQVSLPDGSTMLLNTASAVSI DFTNGRRQVTLLEGEAFFDVRHDPAHPFRVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGE MVTATAKALSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRLDDVPGAIRTLAD AAGATMNRLPGGIILLR >Mature_336_residues AHDGAEDDKSGGAFTHPDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFRYLEAMWRSPELGKAAEGLPAA ARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQYPALMLRWQADYITATGGRAQVSLPDGSTMLLNTASAVSID FTNGRRQVTLLEGEAFFDVRHDPAHPFRVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGEM VTATAKALSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDLVVTGNYRLDDVPGAIRTLADA AGATMNRLPGGIILLR
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=191, Percent_Identity=29.8429319371728, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 37177; Mature: 37046
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDGAEDDKSGGAFTHPDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH YLEAMWRSPELGKAAEGLPAAARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQ HHHHHHCCCCCCCHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC YPALMLRWQADYITATGGRAQVSLPDGSTMLLNTASAVSIDFTNGRRQVTLLEGEAFFDV CCEEEEEEECCEEEECCCEEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEECCEEEEE RHDPAHPFRVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGE CCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEECCCC MVTATAKALSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDL HHHHHHHHHHHHHCCCHHHHEEECCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCE VVTGNYRLDDVPGAIRTLADAAGATMNRLPGGIILLR EEECCEEECCCCHHHHHHHHHHCCHHHHCCCCEEEEC >Mature Secondary Structure AHDGAEDDKSGGAFTHPDPIVDEALEWLARRQNAPLELAEQRQFQEWLLRSPRHGEEFR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH YLEAMWRSPELGKAAEGLPAAARGSVNRRRLLSAARYVQSWSLRGVAAAAILMIAIGAWQ HHHHHHCCCCCCCHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC YPALMLRWQADYITATGGRAQVSLPDGSTMLLNTASAVSIDFTNGRRQVTLLEGEAFFDV CCEEEEEEECCEEEECCCEEEEECCCCCEEEEECCCEEEEEECCCCEEEEEEECCEEEEE RHDPAHPFRVAAHYGETEVKGTAFAVRTESDQDTIVLERGRVEVSRLSDSGDHVELDPGE CCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEECCCC MVTATAKALSVVARRDPSEILAWRDGRIIFENQRLAHVLDELRRYYDGIVIVADARVGDL HHHHHHHHHHHHHCCCHHHHEEECCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCE VVTGNYRLDDVPGAIRTLADAAGATMNRLPGGIILLR EEECCEEECCCCHHHHHHHHHHCCHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]