| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is cyaD [H]
Identifier: 75674734
GI number: 75674734
Start: 598641
End: 599987
Strand: Direct
Name: cyaD [H]
Synonym: Nwi_0536
Alternate gene names: 75674734
Gene position: 598641-599987 (Clockwise)
Preceding gene: 75674733
Following gene: 75674735
Centisome position: 17.6
GC content: 59.84
Gene sequence:
>1347_bases TTGTCTCCTAGCCAGGCCTCGCTCGCGACCGTTCGCCAGTTCCAGTCGGAGACCGACGCAATCCGGGAGGCGGCGGAGCC GCTGGTCGCGCGCGTCACCCTGTTCGTATTGTCCGCATTCCTGGTTTCGATCGTCGCAATTCTGTGTCTGACGCAGGTCG ATCGCGTCATCACCAGCTTGAGCGGAAATATCGTCCCTGTCGGTCATGTCAATGTCTTGCAGGCGCTCGATCCATCGATC ATCAAGACGATCGACGTGCGCGAGGGCGAGCAGGTGAAGACCGGGCAGTTGCTCGCGACGCTCGATGCCACTTTCACCTC GGCGGATCTGACGCAGGCGAAGTTGCAGATCGCGAGCCTGGAAGCGCAGGCGGCGCGCGATGAGGCGGAGTTGAAACAGC AGCCGCTGGTGTTTCCTGATAATCCGGATTCCGACTTCCAGAAGTACGCCGCTTTGCAGAAGGCGCTCTATGAACAGCGC GTGGCTCAGTATCAGGCCCAGATCAACAGCTTCGAATCAAAGATCAGGGAAACCAAGGCGACGATCGAGAAACTTCGCGC TGATGATACCCGCTATCGGCAGCGCGAGGAGATCATGGCGAAGATCGAGCAGATGCGCACGACGCTTGCCGAGCGCGGCA CCGGATCCCAGCTCAACATGTACATCTCCCAGGACGCCAGGCTGGAGTTGCTGCGGACGCTGGAGAATGCGCACAACGGC CTGATCGAGGCGCAGAACACACTCGGATCGATCACCGCCGATCGCGATGCATTCAAGCAGCAGTGGTTCGCGCAACTGAG CCAGGACCTGGTGACGACGCGCAACAAGCTGGATGAAGCGCGGGCAACTTATGAGAAAGCTTTCAAGCACCAGGATCTCG TGCGCTGGACGGCTGCCGAACCATCCGTGGTGCTGACAATGGCCAAGCTTTCGGTCGGATCAGTGCTCAAACCGGGCGAT CCCTTCATTACGCTCATGCCGATCGACACCAAGCTTGAAGCGGAAATCAGGATCTCCTCGCGGGATGTGGGATTCATCCG GGCAGGCGACCCCTGCGTGATGAAGATCGATGCTTTCAACGCGGCGGAGCATGGCACGGCGCATGGCAAGGTGCGCTGGA TCAGCGAGGGCACATTCACGACCGACGATGACGGCAAGCCGGTCGATGCCTATTACAAGGCGAGATGCTCGGTGGACGCG TCCGCCTTCAAGGGCGTGCCGAGCAATTTTCGTCTCATTCCCGGCATGACCCTGCAAGGAGATATCAACGTCGGGACCCG TTCTGTGGCGATGTATCTGCTCGGCGGAATGCTGAAAGGCATGAGCGAGGCCATGCGGGAGCCATGA
Upstream 100 bases:
>100_bases CTGGCGCGGAACGATATCTACAGTTCGCTCTGGTACCAGCAGAATACGCATCTCGCGCCGGCGGTCCGCAACGATAAGCC GAAACTCCGGAGTCCGACCC
Downstream 100 bases:
>100_bases TGCTTTCATCCAGATCGCTTCTCCAGTGGGTTCGTCGTCCGGTTCTTGGGCCTTCTCGCGGTGGCCTCTTCGAGCATGGA ATGGGCGCGTATGAGCGCGG
Product: type I secretion membrane fusion protein, HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSPSQASLATVRQFQSETDAIREAAEPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSLSGNIVPVGHVNVLQALDPSI IKTIDVREGEQVKTGQLLATLDATFTSADLTQAKLQIASLEAQAARDEAELKQQPLVFPDNPDSDFQKYAALQKALYEQR VAQYQAQINSFESKIRETKATIEKLRADDTRYRQREEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNG LIEAQNTLGSITADRDAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAEPSVVLTMAKLSVGSVLKPGD PFITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFNAAEHGTAHGKVRWISEGTFTTDDDGKPVDAYYKARCSVDA SAFKGVPSNFRLIPGMTLQGDINVGTRSVAMYLLGGMLKGMSEAMREP
Sequences:
>Translated_448_residues MSPSQASLATVRQFQSETDAIREAAEPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSLSGNIVPVGHVNVLQALDPSI IKTIDVREGEQVKTGQLLATLDATFTSADLTQAKLQIASLEAQAARDEAELKQQPLVFPDNPDSDFQKYAALQKALYEQR VAQYQAQINSFESKIRETKATIEKLRADDTRYRQREEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNG LIEAQNTLGSITADRDAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAEPSVVLTMAKLSVGSVLKPGD PFITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFNAAEHGTAHGKVRWISEGTFTTDDDGKPVDAYYKARCSVDA SAFKGVPSNFRLIPGMTLQGDINVGTRSVAMYLLGGMLKGMSEAMREP >Mature_447_residues SPSQASLATVRQFQSETDAIREAAEPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSLSGNIVPVGHVNVLQALDPSII KTIDVREGEQVKTGQLLATLDATFTSADLTQAKLQIASLEAQAARDEAELKQQPLVFPDNPDSDFQKYAALQKALYEQRV AQYQAQINSFESKIRETKATIEKLRADDTRYRQREEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNGL IEAQNTLGSITADRDAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAEPSVVLTMAKLSVGSVLKPGDP FITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFNAAEHGTAHGKVRWISEGTFTTDDDGKPVDAYYKARCSVDAS AFKGVPSNFRLIPGMTLQGDINVGTRSVAMYLLGGMLKGMSEAMREP
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 49464; Mature: 49333
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSQASLATVRQFQSETDAIREAAEPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGNIVPVGHVNVLQALDPSIIKTIDVREGEQVKTGQLLATLDATFTSADLTQAKLQIASL CCCEEEECCHHHHHHCCHHHHEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH EAQAARDEAELKQQPLVFPDNPDSDFQKYAALQKALYEQRVAQYQAQINSFESKIRETKA HHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEKLRADDTRYRQREEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCC LIEAQNTLGSITADRDAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAE CEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC PSVVLTMAKLSVGSVLKPGDPFITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFN CCEEEEEHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCEEEEECCCCEEEEEECCC AAEHGTAHGKVRWISEGTFTTDDDGKPVDAYYKARCSVDASAFKGVPSNFRLIPGMTLQG CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCEECCCEEEEC DINVGTRSVAMYLLGGMLKGMSEAMREP CCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPSQASLATVRQFQSETDAIREAAEPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGNIVPVGHVNVLQALDPSIIKTIDVREGEQVKTGQLLATLDATFTSADLTQAKLQIASL CCCEEEECCHHHHHHCCHHHHEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH EAQAARDEAELKQQPLVFPDNPDSDFQKYAALQKALYEQRVAQYQAQINSFESKIRETKA HHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIEKLRADDTRYRQREEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCC LIEAQNTLGSITADRDAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAE CEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC PSVVLTMAKLSVGSVLKPGDPFITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFN CCEEEEEHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCEEEEECCCCEEEEEECCC AAEHGTAHGKVRWISEGTFTTDDDGKPVDAYYKARCSVDASAFKGVPSNFRLIPGMTLQG CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCEECCCEEEEC DINVGTRSVAMYLLGGMLKGMSEAMREP CCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]