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The map label for this gene is ybeQ [H]

Identifier: 75674735

GI number: 75674735

Start: 599987

End: 602029

Strand: Direct

Name: ybeQ [H]

Synonym: Nwi_0537

Alternate gene names: 75674735

Gene position: 599987-602029 (Clockwise)

Preceding gene: 75674734

Following gene: 75674736

Centisome position: 17.64

GC content: 63.24

Gene sequence:

>2043_bases
ATGCTTTCATCCAGATCGCTTCTCCAGTGGGTTCGTCGTCCGGTTCTTGGGCCTTCTCGCGGTGGCCTCTTCGAGCATGG
AATGGGCGCGTATGAGCGCGGCGAGTATCTTGAAGCGGTCAGGTGCTGGAAGCTGGCGCTGGAGGCGGGCGAGGCCGAGG
CCGCCTATCGGATCGGAAGGCTTTATGTGAAAGGCGAAGGGGTCGTCAGGAGCGTGCCAGATGCCGCGATCTGGTATGAG
CGCGCGGCCCGGCTGGGCCATGTCGACGCGCAGTTTCAACTCGGCCTGATCTTTCTGCAGGGGGAGAAGCCGCTGCTGGG
CCCGCATCGCCACGAAACATGGCGCCAGTCCTCGGCCATACGTCTCGGCGACAAGGCGTCGAACATACACCAGCTTGTGT
TTCCGCATGGAACGAGCGTTGAGCGGAATGTTGACGCTGCGTTTCACTGGATATCGGCCGCGGCGGACAAAGGCAAAGCC
GAAGCGCAGACGGTCCTCGGCAATATGTACAGTGAGGGATTAGGCTGCGAGAAGAATCTCCAGATAGCGCTTGCATGGTA
TGGGGTTGCGGCCGAGCAGAACTGTGCTGCCGCGGAATTCGCTCTCGGCGATATTCATTTTCAGGGCAAAGGGGTTCCCG
TCGACTTCGAGCAGGCCGCGGTCTGGTATCGCAAGGCGGCCGAGCAGGATCACGTCAGGGCGCAGGTCGCGCTCGCGTTC
ATGAACCTGAAGGGAACGGGAATGCCGGAGAACCCTGCGGAAGCGGCACGCCTGTTCCAGGGCGCTGCGATGCATGACGA
TATCATCGCGCTGTACAACATCGGCTTGTTACGCCTGAAGGGCCATGGCGTCGCGAAGGATATCGACAAGGCTGAAACCG
CGCTGCGCAAGGCGGCGCGCAAGGATTACTTTCCCGCGATTCAGGCGCTGGCGGAATTCTATTCGCACGGCGGAGGATTT
GCTCCGGATCTTCGGGAGGCCGCGGTCTGGTATGAGAAGGCCGCCGAGCGGGACGACGTACAGGCGCAATTCTTCATGGG
CCGATTCTATGCGATGGGCACCGGCGTCGGCCCGAACATTCGTCAGGCTGCAAAATGGTTCGAGCGCGCGGCCCGCAACG
GTCACGCGACTGCCGCGTTCAACATCGCCATTTTTTATCTCAACGGATCCGGCGTCGAACGCGATGTAGACCGCGCGATC
GAATGGTTCGAGCGCGCGTCCGAAGGCGGCATCCGCGCCGCGCAGCTGCAGCTCGGAAAACTTTATTCGGCAGGCAACGG
TGTGCCGCGCGATCAGAAGCTGGCAAGAGAATGGCTCGGCAAGGCCGCCAACGGCGGAGACCCGGACGCCCAGACGGCCT
ATGCGCTTTTCCTGCTTCGTCAGGATGGTTCAGCGGAACAGCTCGAGCAGGCAAAGGCGCTGCTGGTCGAGGCGGCCGAG
GCCGATCACGCGCCGGCTGCGTTCCAGCTCGGCGTGCTGCATATGGGCAAGTTCGGGGGAGAAACAGACATCGCGGCCGC
CGTTCCATGGTTCGCACGCGCCGCCGGCGCGGGGCATGTCGATGCACAATATACCCTTGCGCTGCTTCATCTCGATCCGG
GCAGCGGCATGAGTGACGCGAAGGCTGCCGCGTCATGGATGACGAAGGCCGCTCATGCGGGCCATGCCGGCGCGCAGTTT
CAGCTCGCCGTGCTGTATTGCACCGGCGCCGGCCTGGCTCAGGATGTCGCGCAAGGGGTGAGGTGGTACGAGGCCGCCGC
GCAACAGGGACACAGGATCGCGCAGTTCAACCTCGCGGTGATGCTTGGAAAAGGACAGGGATGCGAGGTCGACCTCGGGA
AGGCGGTCGAATGGTTCGAGAAGGCGGCCCGGCAGGATGTGGCGGAAGCGCAGATTGCGCTCGGCGACGCGTTGATGTCG
GGAAGCGGCGTGACGAAGGATCAGGATGCGGCGGTGCAGTGGTATCGCCGGGCGGCCGGTCACAACCATGAAGGCGCCCG
GCACCGTCTGAATGCGATCGGCGTAACGACGGTCGATGGCTGA

Upstream 100 bases:

>100_bases
TGACCCTGCAAGGAGATATCAACGTCGGGACCCGTTCTGTGGCGATGTATCTGCTCGGCGGAATGCTGAAAGGCATGAGC
GAGGCCATGCGGGAGCCATG

Downstream 100 bases:

>100_bases
GCGCCGTTCGCTATCAGGTTCGATCTTGAGGATTTGAATGCGGGGCTATCCTTCTTCACGCAAGGTTTCGCGGACGGGAC
GCCAGATGCCTGCCTTCGGT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MLSSRSLLQWVRRPVLGPSRGGLFEHGMGAYERGEYLEAVRCWKLALEAGEAEAAYRIGRLYVKGEGVVRSVPDAAIWYE
RAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQSSAIRLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKA
EAQTVLGNMYSEGLGCEKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAF
MNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAARKDYFPAIQALAEFYSHGGGF
APDLREAAVWYEKAAERDDVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDRAI
EWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAE
ADHAPAAFQLGVLHMGKFGGETDIAAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQF
QLAVLYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMS
GSGVTKDQDAAVQWYRRAAGHNHEGARHRLNAIGVTTVDG

Sequences:

>Translated_680_residues
MLSSRSLLQWVRRPVLGPSRGGLFEHGMGAYERGEYLEAVRCWKLALEAGEAEAAYRIGRLYVKGEGVVRSVPDAAIWYE
RAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQSSAIRLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKA
EAQTVLGNMYSEGLGCEKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAF
MNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAARKDYFPAIQALAEFYSHGGGF
APDLREAAVWYEKAAERDDVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDRAI
EWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAE
ADHAPAAFQLGVLHMGKFGGETDIAAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQF
QLAVLYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMS
GSGVTKDQDAAVQWYRRAAGHNHEGARHRLNAIGVTTVDG
>Mature_680_residues
MLSSRSLLQWVRRPVLGPSRGGLFEHGMGAYERGEYLEAVRCWKLALEAGEAEAAYRIGRLYVKGEGVVRSVPDAAIWYE
RAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQSSAIRLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKA
EAQTVLGNMYSEGLGCEKNLQIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAF
MNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAARKDYFPAIQALAEFYSHGGGF
APDLREAAVWYEKAAERDDVQAQFFMGRFYAMGTGVGPNIRQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDRAI
EWFERASEGGIRAAQLQLGKLYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAE
ADHAPAAFQLGVLHMGKFGGETDIAAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDAKAAASWMTKAAHAGHAGAQF
QLAVLYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAVMLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMS
GSGVTKDQDAAVQWYRRAAGHNHEGARHRLNAIGVTTVDG

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=521, Percent_Identity=27.2552783109405, Blast_Score=126, Evalue=7e-29,
Organism=Homo sapiens, GI151301150, Length=461, Percent_Identity=27.114967462039, Blast_Score=120, Evalue=4e-27,
Organism=Escherichia coli, GI87081769, Length=319, Percent_Identity=32.9153605015674, Blast_Score=138, Evalue=9e-34,
Organism=Escherichia coli, GI1786867, Length=113, Percent_Identity=34.5132743362832, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=364, Percent_Identity=26.9230769230769, Blast_Score=97, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=222, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355295, Length=469, Percent_Identity=24.7334754797441, Blast_Score=103, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 73395; Mature: 73395

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSRSLLQWVRRPVLGPSRGGLFEHGMGAYERGEYLEAVRCWKLALEAGEAEAAYRIGR
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEE
LYVKGEGVVRSVPDAAIWYERAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQSSAI
EEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCCE
RLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKAEAQTVLGNMYSEGLGCEKNL
EECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
QIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAF
EEEEEEEEECCCCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEE
MNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAAR
EECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
KDYFPAIQALAEFYSHGGGFAPDLREAAVWYEKAAERDDVQAQFFMGRFYAMGTGVGPNI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH
RQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDRAIEWFERASEGGIRAAQLQLGK
HHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHH
LYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAE
HHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHC
ADHAPAAFQLGVLHMGKFGGETDIAAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDA
CCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHH
KAAASWMTKAAHAGHAGAQFQLAVLYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAV
HHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
MLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMSGSGVTKDQDAAVQWYRRAAG
EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
HNHEGARHRLNAIGVTTVDG
CCCCCHHHHHHEEEEEEECC
>Mature Secondary Structure
MLSSRSLLQWVRRPVLGPSRGGLFEHGMGAYERGEYLEAVRCWKLALEAGEAEAAYRIGR
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEE
LYVKGEGVVRSVPDAAIWYERAARLGHVDAQFQLGLIFLQGEKPLLGPHRHETWRQSSAI
EEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCCE
RLGDKASNIHQLVFPHGTSVERNVDAAFHWISAAADKGKAEAQTVLGNMYSEGLGCEKNL
EECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
QIALAWYGVAAEQNCAAAEFALGDIHFQGKGVPVDFEQAAVWYRKAAEQDHVRAQVALAF
EEEEEEEEECCCCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEE
MNLKGTGMPENPAEAARLFQGAAMHDDIIALYNIGLLRLKGHGVAKDIDKAETALRKAAR
EECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH
KDYFPAIQALAEFYSHGGGFAPDLREAAVWYEKAAERDDVQAQFFMGRFYAMGTGVGPNI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH
RQAAKWFERAARNGHATAAFNIAIFYLNGSGVERDVDRAIEWFERASEGGIRAAQLQLGK
HHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHH
LYSAGNGVPRDQKLAREWLGKAANGGDPDAQTAYALFLLRQDGSAEQLEQAKALLVEAAE
HHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHHHHHC
ADHAPAAFQLGVLHMGKFGGETDIAAAVPWFARAAGAGHVDAQYTLALLHLDPGSGMSDA
CCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHH
KAAASWMTKAAHAGHAGAQFQLAVLYCTGAGLAQDVAQGVRWYEAAAQQGHRIAQFNLAV
HHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
MLGKGQGCEVDLGKAVEWFEKAARQDVAEAQIALGDALMSGSGVTKDQDAAVQWYRRAAG
EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
HNHEGARHRLNAIGVTTVDG
CCCCCHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]