| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is aroK
Identifier: 75674593
GI number: 75674593
Start: 442655
End: 443299
Strand: Direct
Name: aroK
Synonym: Nwi_0395
Alternate gene names: 75674593
Gene position: 442655-443299 (Clockwise)
Preceding gene: 75674588
Following gene: 75674594
Centisome position: 13.01
GC content: 65.74
Gene sequence:
>645_bases TTGACGTCCGAAACCGTTTCACCGTCCAGCTTCGGAGCATCCCCCGAGACCGCCGTTGTCGCGGCGCTCGCGGGGCGGTC GCTGGCGCTGGTCGGCATGATGGGAGCCGGCAAGTCCACCATCGGACGCCGGCTGGCGGCGCGCCTCAGGATGCGATTCG TCGATGCCGACGCCGAAATCGAACTCGCGGCCGGAATGCCGATTCCCGAAATCTTCGAAACCCACGGCGAGCCCCATTTC CGGGATGGCGAGGCGCGCGTGATCGCACGGTTGCTGAATGGCGGCCCGATCGTGCTCGCAACAGGCGGCGGCGCCGTGCT GCGCGAGGAGACCCGGGCACGCCTCTCAGAACGGGCGGTCTCGATCTGGCTGAAGGCGGACGCCGAGGTGATTCTGCGCC GGGTCAGGCGCCGCGCCGACAGACCCTTGCTGCAAACGGCCGATCCCGCCGCGACGATCAAGCGCCTTATCGCCGAGCGC GAGCCGATCTATCGACAGGCGGATATCACGGTCGCCTCGCGCGACGTGCCGTATGAATGGATCGTCGATGAATGCATCGG CCTGCTTCATCGCAGGCTTTGCCGCGGCGAAATGACTCGAAATGCGATGAAAGACCCTGACGAGGGATTTGACACCACGC AATGA
Upstream 100 bases:
>100_bases TCGTCGTGAGCTTTGGATCTGACATTCTCCGTCGGAAATCGCGAAAGGTCCGAATGTCGAATCCGTTTCGGGCGCGCAAC CATGTTCCGGCAGGTGACCC
Downstream 100 bases:
>100_bases CCATTCCGATCAAAGAATCAGACCCGATCACGGTCGATGTCGCGCTCGGTGAGCGCTCCTACGACATTGTCATCGGACGA GGCGTCCTGCCGTCGCTGGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTSETVSPSSFGASPETAVVAALAGRSLALVGMMGAGKSTIGRRLAARLRMRFVDADAEIELAAGMPIPEIFETHGEPHF RDGEARVIARLLNGGPIVLATGGGAVLREETRARLSERAVSIWLKADAEVILRRVRRRADRPLLQTADPAATIKRLIAER EPIYRQADITVASRDVPYEWIVDECIGLLHRRLCRGEMTRNAMKDPDEGFDTTQ
Sequences:
>Translated_214_residues MTSETVSPSSFGASPETAVVAALAGRSLALVGMMGAGKSTIGRRLAARLRMRFVDADAEIELAAGMPIPEIFETHGEPHF RDGEARVIARLLNGGPIVLATGGGAVLREETRARLSERAVSIWLKADAEVILRRVRRRADRPLLQTADPAATIKRLIAER EPIYRQADITVASRDVPYEWIVDECIGLLHRRLCRGEMTRNAMKDPDEGFDTTQ >Mature_213_residues TSETVSPSSFGASPETAVVAALAGRSLALVGMMGAGKSTIGRRLAARLRMRFVDADAEIELAAGMPIPEIFETHGEPHFR DGEARVIARLLNGGPIVLATGGGAVLREETRARLSERAVSIWLKADAEVILRRVRRRADRPLLQTADPAATIKRLIAERE PIYRQADITVASRDVPYEWIVDECIGLLHRRLCRGEMTRNAMKDPDEGFDTTQ
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=43.7125748502994, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1786587, Length=160, Percent_Identity=29.375, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_NITWN (Q3SVM9)
Other databases:
- EMBL: CP000115 - RefSeq: YP_317014.1 - ProteinModelPortal: Q3SVM9 - SMR: Q3SVM9 - STRING: Q3SVM9 - GeneID: 3676980 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_0395 - NMPDR: fig|323098.3.peg.566 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: Q3SVM9 - ProtClustDB: PRK13946 - BioCyc: NWIN323098:NWI_0395-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 23443; Mature: 23312
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 57-57 BINDING 81-81 BINDING 103-103 BINDING 141-141 BINDING 160-160
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSETVSPSSFGASPETAVVAALAGRSLALVGMMGAGKSTIGRRLAARLRMRFVDADAEI CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCE ELAAGMPIPEIFETHGEPHFRDGEARVIARLLNGGPIVLATGGGAVLREETRARLSERAV EEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH SIWLKADAEVILRRVRRRADRPLLQTADPAATIKRLIAEREPIYRQADITVASRDVPYEW HHHHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHH IVDECIGLLHRRLCRGEMTRNAMKDPDEGFDTTQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSETVSPSSFGASPETAVVAALAGRSLALVGMMGAGKSTIGRRLAARLRMRFVDADAEI CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCE ELAAGMPIPEIFETHGEPHFRDGEARVIARLLNGGPIVLATGGGAVLREETRARLSERAV EEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH SIWLKADAEVILRRVRRRADRPLLQTADPAATIKRLIAEREPIYRQADITVASRDVPYEW HHHHHCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHH IVDECIGLLHRRLCRGEMTRNAMKDPDEGFDTTQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA