Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is chrA1 [H]

Identifier: 74318674

GI number: 74318674

Start: 2731975

End: 2733498

Strand: Direct

Name: chrA1 [H]

Synonym: Tbd_2656

Alternate gene names: 74318674

Gene position: 2731975-2733498 (Clockwise)

Preceding gene: 74318669

Following gene: 74318675

Centisome position: 93.89

GC content: 67.26

Gene sequence:

>1524_bases
ATGAGAGACACTGGGAGGCCGCGCTGGTCCCATGCAGGCGAGCCGCGCGTTGCGCCGCCGCGTCCGCTGCGTCTAGAATC
ACGGCGTCGGGGTACCGGTTCCCGGCATCCGGGTTCCGCCCGCAAGACGTGTCACGTCCAAGCCTGGTTTTATCCACTCT
CGGCTGGAGAACGACTCTTGGACACTGCGCGAACGCTTCCTTTTCCCCCGCCCGCCCCCGTGAAGCTCGGAAGCGCGCTC
CGCTACTGGCTCAAGCTCGGCTTCGTCAGCTTCGGCGGCCCGGCCGGGCAGATCGCGATGATGCATCACGAGCTCGTCGA
GAAACGGCGCTGGATTTCCGAGCACCGCTACCTGCATGCGCTCAACTACTGCATGTTGCTGCCGGGACCCGAGGCCACGC
AGCTCGCGATCTATGTCAGCTGGCTCCTGCACGGCACCCTCGGCGGTGTCCTCGCGGGCGTGCTGTTCGTGCTGCCGGGC
TTCCTGCTGCTCGCGCTCCTCGCCGCGCTCTATCTCGCCTGGGGCGAGGTGACGCTGGTGCAGGGGCTTTTTTACGGCAT
CCGGCCGGCCGTCGTCGCGGTCGTGCTGTTCGCGGCCTGGCGCATCGGCAGCCGCGCGCTCAAGAACGAAGTGCTCTGGG
GCATGGCCGCGCTCGCGTTCATTGGCATCTTCGTCTTCGACATCGGCTTTCCCTGGATCGTCCTCGCCGCGGCACTGCTC
GGTGCGCTCGGCGGCAAGTTCGCGCCGCATAAGTTCAGGACGGGCGGCGGGCATGGCGCCGGCCACAAGGCATACGGCGC
GGCGCTGATCGACGACGATACGCCACCGCCCGCGCACGCGCGATTCGCCTGGCGCCGCCTGCTCGCGACCAGCGGCGTCT
TCGTGCTGATCTGGCTCGGCGCGATGCTGGCCCTGCGTGGTCTGCCCGAGCTGCAGCACATGGGCGACTTCTTTACCGGC
GCGGCCTTCCTCACGATCGGCGGCGCCTACGCCGTGCTGCCCTATGTCTACGAAGGCGCGGTCGAACAGTTCGGCTGGCT
GAGCGGGGTGCAGATGATGGACGGCCTCGCGCTCGGCGAGACGACGCCGGGGCCGCTCATCATGGTCGTCACCTGGGTCG
GCTATCTGGGCGGCGTGAGCAAGGAGATTCTTGCCGACCCGGTCGCCGCCGGGTTTGCCGGCGCGGCCGTCGCAACTTTT
TTCACCTTCCTGCCGTCCTTCTTTTTCATCCTCGCCGGCGCCCCGCTGGTCGAGGCGACGCGCGGCGAGCTCAGGTTCAC
GGCGCCGCTCACCGGAATCACCGCCGCGGTCGTCGGCGTCATCGTCAATCTGGCGGTATTCTTTGCATGGCACAGCTTCT
GGCCGCAGGGAAGCGCGGACGCGCCGTTCAGGGGTGATTTCGAGTGGTTTTCGGTCATCGTCGCGGTCGTCGCCTTTGTC
GCGCTGTGGAAATACCGCGCCGACATCGTCAAGGTCATCGGCGCCTGCGCCCTCGTCGGGCTGGCGTATTCGTCATATAT
GTGA

Upstream 100 bases:

>100_bases
CGTCGACAGTCCGCACGGACGCGGCCTTTGCTGCAATCCTAGTGGCGCGTACCCATAGACAACAGTCGTAATTTTTTATA
GGAACGATAAACGAGAACGT

Downstream 100 bases:

>100_bases
GGACAGCATGGAACCCAAGATCATTCAGCCGCCGAAACGCTGTGGCTGTGCAAACCCCAGTGAGAAATGCGAGGAACTCG
CGCGCACAATCCGGCCCGGG

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL
RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG
FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL
GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG
AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF
FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV
ALWKYRADIVKVIGACALVGLAYSSYM

Sequences:

>Translated_507_residues
MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL
RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG
FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL
GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG
AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF
FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV
ALWKYRADIVKVIGACALVGLAYSSYM
>Mature_507_residues
MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLLDTARTLPFPPPAPVKLGSAL
RYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHALNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPG
FLLLALLAALYLAWGEVTLVQGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL
GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLGAMLALRGLPELQHMGDFFTG
AAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGETTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATF
FTFLPSFFFILAGAPLVEATRGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV
ALWKYRADIVKVIGACALVGLAYSSYM

Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 54718; Mature: 54718

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHH
DTARTLPFPPPAPVKLGSALRYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPGFLLLALLAALYLAWGEVTLV
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLG
HHHCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
AMLALRGLPELQHMGDFFTGAAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGE
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATFFTFLPSFFFILAGAPLVEAT
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
RGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALWKYRADIVKVIGACALVGLAYSSYM
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDTGRPRWSHAGEPRVAPPRPLRLESRRRGTGSRHPGSARKTCHVQAWFYPLSAGERLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEEEHHCCHHHH
DTARTLPFPPPAPVKLGSALRYWLKLGFVSFGGPAGQIAMMHHELVEKRRWISEHRYLHA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNYCMLLPGPEATQLAIYVSWLLHGTLGGVLAGVLFVLPGFLLLALLAALYLAWGEVTLV
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGLFYGIRPAVVAVVLFAAWRIGSRALKNEVLWGMAALAFIGIFVFDIGFPWIVLAAALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GALGGKFAPHKFRTGGGHGAGHKAYGAALIDDDTPPPAHARFAWRRLLATSGVFVLIWLG
HHHCCCCCCCCCCCCCCCCCCCHHHCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
AMLALRGLPELQHMGDFFTGAAFLTIGGAYAVLPYVYEGAVEQFGWLSGVQMMDGLALGE
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TTPGPLIMVVTWVGYLGGVSKEILADPVAAGFAGAAVATFFTFLPSFFFILAGAPLVEAT
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
RGELRFTAPLTGITAAVVGVIVNLAVFFAWHSFWPQGSADAPFRGDFEWFSVIVAVVAFV
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ALWKYRADIVKVIGACALVGLAYSSYM
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2180932; 12471500 [H]