| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318470
Identifier: 74318470
GI number: 74318470
Start: 2521708
End: 2522436
Strand: Reverse
Name: 74318470
Synonym: Tbd_2452
Alternate gene names: NA
Gene position: 2522436-2521708 (Counterclockwise)
Preceding gene: 74318472
Following gene: 74318469
Centisome position: 86.69
GC content: 64.2
Gene sequence:
>729_bases ATGCATTTGGATAAATTGCCCGCAGCGGTTGACCCGGGGCGCACCGCCGAGACCAATTACTCGGCGCGCGAGTCCTGGCG GATGCTCGGGATTATGGCAGAGTTTGTCGAGGCGACTGAGCGGCTCGCCCCGATCCGCCCGGCGGTCTCGATCTTCGGCA GCGCGCGCACGCCGCCCGATCACGCCTACTACACGCTGACCGAGGACATCGCGCGCAAGCTCTCCGATGCCGGGTTCTCC GTGATCTCGGGCGGCGGGCCCGGCATCATGGAAGCGGCGAACAAGGGCGCGTATTTCGGCAAGTCGCCGAGCGTCGGCCT CAACATCCAGCTGCCGCACGAGCAGAGCGCGAATGCCTACCAGGACATCAGCCAGACCTTCCAGCATTTCTTCGCGCGCA AGGTCATGTTCGTCAAGTTCGCTGCGGCCTACGTCGTCATGCCCGGCGGCTACGGCACGCTCGACGAACTGACCGAAGCG CTGACGCTCGTGCAGACCGGCAAGATCCAGCGCATTCCGATCATCCTCGTCGGCTCCTCATTCTGGGGCGGGCTTGCGGA GTGGGTCGGGACCCGTCTCGTGAAGGAGGGGATGGTCTCGGCCGAGGACGTGGAACTGATGCGCGTGCTCGACAAGCCGG AAGAGGTGGTCGACGCGATCTTCAACCATTACGAGAAGCGCGGCTTCATGCCTTCGCCGGCCGAGCGCGAAATCCAGTTC AATCTCTGA
Upstream 100 bases:
>100_bases AGCGCATGAAAGGCGCGGTACAGATAGGACGAGCCGTCCACCAACAACAGGGTCTTGCCGGGCTGACTTACACTAGGATC GTTCACGAGGCGCTCGAAAA
Downstream 100 bases:
>100_bases CGTCATCCGACCCAACCGACCTTCATCTTCCGGAGCCCGCCATGCGCTACCCTGTTCTGCTGTTGACCCTCGTGCTGTGC GGCGCCGCCGTCGCGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF NL
Sequences:
>Translated_242_residues MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF NL >Mature_242_residues MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPDHAYYTLTEDIARKLSDAGFS VISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAYQDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEA LTLVQTGKIQRIPIILVGSSFWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF NL
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26619; Mature: 26619
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC HAYYTLTEDIARKLSDAGFSVISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAY CEEEEHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHH QDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEALTLVQTGKIQRIPIILVGSS HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEECEEEEECCC FWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE NL CC >Mature Secondary Structure MHLDKLPAAVDPGRTAETNYSARESWRMLGIMAEFVEATERLAPIRPAVSIFGSARTPPD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC HAYYTLTEDIARKLSDAGFSVISGGGPGIMEAANKGAYFGKSPSVGLNIQLPHEQSANAY CEEEEHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHH QDISQTFQHFFARKVMFVKFAAAYVVMPGGYGTLDELTEALTLVQTGKIQRIPIILVGSS HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEECEEEEECCC FWGGLAEWVGTRLVKEGMVSAEDVELMRVLDKPEEVVDAIFNHYEKRGFMPSPAEREIQF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE NL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA