Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318288

Identifier: 74318288

GI number: 74318288

Start: 2341343

End: 2342107

Strand: Reverse

Name: 74318288

Synonym: Tbd_2270

Alternate gene names: NA

Gene position: 2342107-2341343 (Counterclockwise)

Preceding gene: 74318293

Following gene: 74318286

Centisome position: 80.49

GC content: 66.54

Gene sequence:

>765_bases
ATGAATACCTTTGTCCACACGCTGATGACCGGGCTGATCGGGCTGTTCGCACTCGTCGGCGCGGCGCAGGCCGCCGAAAC
GCTGAACGTCTACGGCCCCGGCGGCCCGGCGCCGGCGATGAAGGAGGCCGCGAGCGCGTTCGAGAAAAAAACCGGCACGA
AGGTCGTGGTCACCGCCGGGCCGACGCCGGAATGGATCGACAAAGCCAAGGCCGACGCCGACGTCGTCTACGGCGGGTCC
GAGCACATGATGACCGACTTCGTCGGCGCGATGGAGGGGCGGATCGACGCGCCCGAGGTGGAGCCGCTGTACCTGCGCCC
CTACGCGATTCTCGTCCGTCCGGGCAACCCCGCGAAAATTTCGGGCGTCAAGGATCTGCTGCGCCCCGGCGTGCAGATTC
TTGTCGTGAACGGCGCCGGGCAGACCGGGGCGTGGGAGGACATGGCCGGCCGCAAAGGCGACATCGAAACGGTCAAGCGC
CTGCGCAAGAACATCGTCGCCTACGCCAAGAACAGCGCCGAGGCGAAAAAGACCTGGACCGAAACGCCCGACATCGACGC
GTGGCTGATCTGGAACATCTGGCAGGTGGCGAATCCCGATCTCGCCGAGGTCGTCAAAATCGAGCGCGACTACGCGATCT
ACCGCGACACCAACGTCGTCCTCACGACGCAGGGCAAGACCCGCGCCCCGGCCCGCGAATTCGTCGACTTCCTCGCCTCC
GACGCGGGCGAGGCGATCTTCCGCAAGTGGGGCTGGTCGCGCTGA

Upstream 100 bases:

>100_bases
CTCGATCGGCGGCGGACCCTGCCGCCCGTATTGGCCGCGGCAGAACTTTTGCGCGGTCCCGCCGGTCCTCTTCGCTTCTG
CGAGACGCCAAGGAGCCGCC

Downstream 100 bases:

>100_bases
ACGCCGGGGTCGGCCCGGGCGTTCAGGAACGTGCGCAGCGCATGTCGGGCGAGAGCTTCATCCATTGCACGAGCCAGTTC
TTGGCCCGCTCGCGCGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS
EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR
LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS
DAGEAIFRKWGWSR

Sequences:

>Translated_254_residues
MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS
EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR
LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS
DAGEAIFRKWGWSR
>Mature_254_residues
MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAGPTPEWIDKAKADADVVYGGS
EHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKISGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKR
LRKNIVAYAKNSAEAKKTWTETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS
DAGEAIFRKWGWSR

Specific function: Unknown

COG id: COG4588

COG function: function code R; Accessory colonization factor AcfC, contains ABC-type periplasmic domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27648; Mature: 27648

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAG
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
PTPEWIDKAKADADVVYGGSEHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKI
CCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCH
SGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKRLRKNIVAYAKNSAEAKKTWT
HHHHHHHCCCEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
ETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS
CCCCCCEEEEEEHHHHCCCCHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHC
DAGEAIFRKWGWSR
CHHHHHHHHCCCCC
>Mature Secondary Structure
MNTFVHTLMTGLIGLFALVGAAQAAETLNVYGPGGPAPAMKEAASAFEKKTGTKVVVTAG
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
PTPEWIDKAKADADVVYGGSEHMMTDFVGAMEGRIDAPEVEPLYLRPYAILVRPGNPAKI
CCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCH
SGVKDLLRPGVQILVVNGAGQTGAWEDMAGRKGDIETVKRLRKNIVAYAKNSAEAKKTWT
HHHHHHHCCCEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
ETPDIDAWLIWNIWQVANPDLAEVVKIERDYAIYRDTNVVLTTQGKTRAPAREFVDFLAS
CCCCCCEEEEEEHHHHCCCCHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHC
DAGEAIFRKWGWSR
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA