Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318280

Identifier: 74318280

GI number: 74318280

Start: 2335215

End: 2335577

Strand: Reverse

Name: 74318280

Synonym: Tbd_2262

Alternate gene names: NA

Gene position: 2335577-2335215 (Counterclockwise)

Preceding gene: 74318281

Following gene: 74318279

Centisome position: 80.27

GC content: 63.09

Gene sequence:

>363_bases
ATGAACCGTATTGATACAGGCCACGTCCTTTCCTCGAGCACCATCTCCGGCGACAAGGTCGTCAACCGCGCCGGCGAAGA
CCTCGGTGAGATCAAGGATCTCATGATCGACGTCGACACGGGCCGCGTTGCCTACGCCGTGCTCGAGTCGGGCGGCTTCC
TCGGCCTCGGCAGCAAGCTCTTCGCCGTGCCGCTGCCGGCGATGGAGGTCGACACCGAGCACCATCGTTTCGTCTTCGAC
CAGGACAAGGAAACACTGAAGAACGCGCCCGGCTTCGACAAGGACCATTGGCCCGACTTCGCCGACCGGACCTGGGGCGC
GAGCGTCCACTCGCATTACGGCATTCGGCCGTACTGGGAGTAA

Upstream 100 bases:

>100_bases
GCACCCTGAGGGCAACAACCCCGTTCCGCGCAAGATCCCGGGCCGCTGAGCCCTCGTGCGTGAAGTCCTTTTTTGTTCTT
AGATCGATAGGAGATAAGTC

Downstream 100 bases:

>100_bases
GCCCTGAGCGAAACCGGCGCGCCCCGGCGTTTCGCCCGCGCGCGCCGCGTGCTCATGCAGTGGTCGACCGCGGCGTGCTT
CGCCGCGGTCGCATTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; Antigen

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD
QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE

Sequences:

>Translated_120_residues
MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD
QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE
>Mature_120_residues
MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKLFAVPLPAMEVDTEHHRFVFD
QDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13360; Mature: 13360

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKL
CCCCCCCCEECCCCCCHHHHHHHHCHHHHHHHHHEEECCCCCEEEEEECCCCEEECCCEE
FAVPLPAMEVDTEHHRFVFDQDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE
EEECCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRIDTGHVLSSSTISGDKVVNRAGEDLGEIKDLMIDVDTGRVAYAVLESGGFLGLGSKL
CCCCCCCCEECCCCCCHHHHHHHHCHHHHHHHHHEEECCCCCEEEEEECCCCEEECCCEE
FAVPLPAMEVDTEHHRFVFDQDKETLKNAPGFDKDHWPDFADRTWGASVHSHYGIRPYWE
EEECCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA