| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pgl [H]
Identifier: 74318139
GI number: 74318139
Start: 2209309
End: 2209995
Strand: Reverse
Name: pgl [H]
Synonym: Tbd_2121
Alternate gene names: 74318139
Gene position: 2209995-2209309 (Counterclockwise)
Preceding gene: 74318140
Following gene: 74318136
Centisome position: 75.95
GC content: 69.72
Gene sequence:
>687_bases GTGAGCCTGCCCGAGGTACGGGTCTTCCCCGACCCCGAACATCTCGTGGCGGCGCTTGCCGACGCCTTGTGCGCCGAGGC CGAGGCCGACATCCGGGCGCGCGGCAGCTTCCATCTGGTGCTCGCGGGCGGCAACACGCCGCGTGAGCTGTATCGGGCGC TCGCCGCGCGCGGTGCCGGCGACGCGCACTGGGTCGTCTGGTACGGCGACGAACGCTGCGTCGCCGCCGACCACCCTGAA CGCAACAGCGTGATGGCGGAAATGGCGTGGCTCGCGGCATCGCGGATTCCGCCGATAAATCGTCATGCAATACCGGCCGA GTGCGGCGCACGCGACGCGGCCGACGCGTATTCGAAGCGACTCGAAGGAGTGGGGGATTTCGACCTCGTGCTGCTCGGGA TGGGCGAAGACGGGCATACCGCGAGCCTGTTTCCGGGACAGGCTTGGGGCGAGACGGCCGACAGCGCCGATGCGCTCGCC GTCCATGATTCGCCGAAGCCGCCGCCCGAGCGGGTGAGCCTGTCTGCGGCGCGCCTCAACCGTAGTCGACGGGTCTGGTT TCTCGTCGGCGGCGCGTCCAAGCGCGAAGCGATGCGGCGTTGGCGCGATGGCGAGCGCCTTCCGGTGGGGGCAATTCACG CACGCACAGAAACCCTGGTCTGGCTCGATCGCGCTGCCGCACCCTAG
Upstream 100 bases:
>100_bases TCGAACGCGAGTTCATCCCGACCTACCCCGCGGGCAGCTGGGGGCCGGCCGAGGCCAACCGCCTGTTCGACAGCGACGAT CAGACCTGGCGCAACGAACT
Downstream 100 bases:
>100_bases GGCGATTGGTCTGCGCCGTTCTCCGCGCCAGCGGTGTTCGTCGGCGCTCCGCCAGCGAGCATCGCGCGGCGTGAATCCGG CGTCTCGAGGCTGATCCGGC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSLPEVRVFPDPEHLVAALADALCAEAEADIRARGSFHLVLAGGNTPRELYRALAARGAGDAHWVVWYGDERCVAADHPE RNSVMAEMAWLAASRIPPINRHAIPAECGARDAADAYSKRLEGVGDFDLVLLGMGEDGHTASLFPGQAWGETADSADALA VHDSPKPPPERVSLSAARLNRSRRVWFLVGGASKREAMRRWRDGERLPVGAIHARTETLVWLDRAAAP
Sequences:
>Translated_228_residues MSLPEVRVFPDPEHLVAALADALCAEAEADIRARGSFHLVLAGGNTPRELYRALAARGAGDAHWVVWYGDERCVAADHPE RNSVMAEMAWLAASRIPPINRHAIPAECGARDAADAYSKRLEGVGDFDLVLLGMGEDGHTASLFPGQAWGETADSADALA VHDSPKPPPERVSLSAARLNRSRRVWFLVGGASKREAMRRWRDGERLPVGAIHARTETLVWLDRAAAP >Mature_227_residues SLPEVRVFPDPEHLVAALADALCAEAEADIRARGSFHLVLAGGNTPRELYRALAARGAGDAHWVVWYGDERCVAADHPER NSVMAEMAWLAASRIPPINRHAIPAECGARDAADAYSKRLEGVGDFDLVLLGMGEDGHTASLFPGQAWGETADSADALAV HDSPKPPPERVSLSAARLNRSRRVWFLVGGASKREAMRRWRDGERLPVGAIHARTETLVWLDRAAAP
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=224, Percent_Identity=36.1607142857143, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI6912586, Length=238, Percent_Identity=34.453781512605, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115533058, Length=240, Percent_Identity=27.5, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115533060, Length=240, Percent_Identity=27.5, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321687, Length=217, Percent_Identity=27.6497695852535, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321957, Length=225, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=183, Percent_Identity=30.6010928961749, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641119, Length=200, Percent_Identity=33, Blast_Score=103, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24711; Mature: 24580
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPEVRVFPDPEHLVAALADALCAEAEADIRARGSFHLVLAGGNTPRELYRALAARGAG CCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHCCCC DAHWVVWYGDERCVAADHPERNSVMAEMAWLAASRIPPINRHAIPAECGARDAADAYSKR CCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHH LEGVGDFDLVLLGMGEDGHTASLFPGQAWGETADSADALAVHDSPKPPPERVSLSAARLN HCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHEEHHHHHCC RSRRVWFLVGGASKREAMRRWRDGERLPVGAIHARTETLVWLDRAAAP CCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCCC >Mature Secondary Structure SLPEVRVFPDPEHLVAALADALCAEAEADIRARGSFHLVLAGGNTPRELYRALAARGAG CCCCEEECCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCHHHHHHHHHHCCCC DAHWVVWYGDERCVAADHPERNSVMAEMAWLAASRIPPINRHAIPAECGARDAADAYSKR CCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHH LEGVGDFDLVLLGMGEDGHTASLFPGQAWGETADSADALAVHDSPKPPPERVSLSAARLN HCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHEEHHHHHCC RSRRVWFLVGGASKREAMRRWRDGERLPVGAIHARTETLVWLDRAAAP CCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]