| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318059
Identifier: 74318059
GI number: 74318059
Start: 2129486
End: 2130340
Strand: Reverse
Name: 74318059
Synonym: Tbd_2041
Alternate gene names: NA
Gene position: 2130340-2129486 (Counterclockwise)
Preceding gene: 74318060
Following gene: 74318058
Centisome position: 73.21
GC content: 70.41
Gene sequence:
>855_bases GTGAGAACCGCCGTCCTGGCCGGCGTGCTTGCCGTGCTGCAAGGCTGTGCCCTGACCGTCAGCGATCCGCGTGCGCGGGC GCCGATCGAGGGCTTCGTGCAGTCGGAGGCCGATGCGCGCGTCTGGGTCGAGCCTGGCTTCGAGGCCTACGGCGCGCGCG TGGCGGCGGCTCTGCCGGCCGCGGTCGCGGCAGTCGAGGCGGCTCACTACCGGCGCTTCGCCCGCGCCCTGCGCGTCCAC GTCTGCGGCAGCGAGGCCTGCTTCGGGCGTTACGTGCTGACGCCGAAGCTCTCGGCGGCCGTCGTTCCCGACAACCGCCT CTTCCTCTCGCCCAAGCTCGATGGCCGCGAAAAGCACCGGCTCGCCGGGCTCCTGACCCATGAACTCGCGCATCTCCATC TCGGCCAGCGCATCGGCTACTACCACAGCACCGTGCCCGTCTGGTTCCACGAAGGCTGGGCGTCGTTGACCGCCCACGGT GGCGGCGCCGAATACGCGAGCGACGCGCAGGTCCGCGCTGCAATCGGGGCGGGCCGCCGCATCGAAGTCGGCGCGCGCGA CACGCGCGACAGGCGGCATCGCGCTGCGGCCGCCGGCCTCGATCCCTACGGCTTCTATCGCCAGTCGATGATGCTCGTCG GCTGGCTCAAGGCGCAGGACGAAAGCCGCTTTCGCGAACTGGTGCTGTCCGTGCAGAATGACGAGGATTTCGAAATCGCG TTCTGGAACGTCTATGGACAGTCGCCCGCGACGCGCCTCGCCGGGTTTTTCGACGGCGCACCGCCCGCCGTACCGGCGGT CGCCGGCGGGTCGATCCAGGCCGCCTCCGCCAACCCCAATCCAGGTTCTCCATGA
Upstream 100 bases:
>100_bases ACCTCGGCTACTGGATCGGCGAGAGCCGCAAGATGGCGTACAAGAAACAGTATCCGCCGCTGCAGGGCTTGGTCGACGGC AGCTGGCAGGCCCTCGAGGC
Downstream 100 bases:
>100_bases AACCCTATCTCGACCTGATGCGCCACGTGCTTGAGCACGGCACACGCAAAGACGACCGCACCGGCACCGGCACCCTGTCG GTCTTCGGCTGGCAGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP
Sequences:
>Translated_284_residues MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP >Mature_284_residues MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPAAVAAVEAAHYRRFARALRVH VCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHRLAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHG GGAEYASDAQVRAAIGAGRRIEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30510; Mature: 30510
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPA CCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH AVAAVEAAHYRRFARALRVHVCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHR HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCHHHH LAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHGGGAEYASDAQVRAAIGAGRR HHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCCCE IEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP EEEEECCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCCCC >Mature Secondary Structure MRTAVLAGVLAVLQGCALTVSDPRARAPIEGFVQSEADARVWVEPGFEAYGARVAAALPA CCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH AVAAVEAAHYRRFARALRVHVCGSEACFGRYVLTPKLSAAVVPDNRLFLSPKLDGREKHR HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCEEECCCCEEEECCCCCCCHHHH LAGLLTHELAHLHLGQRIGYYHSTVPVWFHEGWASLTAHGGGAEYASDAQVRAAIGAGRR HHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCCCE IEVGARDTRDRRHRAAAAGLDPYGFYRQSMMLVGWLKAQDESRFRELVLSVQNDEDFEIA EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE FWNVYGQSPATRLAGFFDGAPPAVPAVAGGSIQAASANPNPGSP EEEEECCCHHHHHHHHCCCCCCCCCEECCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA