Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318028

Identifier: 74318028

GI number: 74318028

Start: 2099499

End: 2100167

Strand: Direct

Name: 74318028

Synonym: Tbd_2010

Alternate gene names: NA

Gene position: 2099499-2100167 (Clockwise)

Preceding gene: 74318024

Following gene: 74318029

Centisome position: 72.15

GC content: 70.25

Gene sequence:

>669_bases
ATGCCCACACCGAACACCCCCCCTGCGCCGCTGAGCGATGCGGAGGTCGACGAGCTGGCCGACCTCATCGACCTTCTCGA
CGAGCGTACCGACGTGCCGATCTCGCTCGAAGGCGTGGACGGCTTCATCACGGCGCTCGCCTGCAGCCCGCGCGCGATCC
CGGACACCGAATACCTTCCGGTGCTGCTCGACCGCGACGAGGGACTCGCGAGCGTGTACGAGAACGAGGCCGACGAGCGG
CGTTTTCTCGCGCTGTTCGCCCGGCGGCGCGACGAGGTCGCCCGCGCACTTGCCGCGCCGATCGAGAACCTTGCCGACCC
GCGCGCGCTTTCGCCGCTGGTCATGGACTGGGAAGCGCTGCTCGCCGACCTCCCCAAGGACGAGGCTACACGGCTGCGTG
CCGCCGGGGTCCCGCCCTACGCCCAGATGTGGGCCGCAGGCTTTCTGCTCGCGGTCGAGCACTGGGAAGACGACTGGACG
CTGCCCGGCGGCAGCAAGGACGAGGCCTTCGTCGACGAGGTGCTCGACCCGTTCTACATCCTGGCTGCACCGCTCGAGGA
ACTCAGCGCCGAGGAGCGCGACACGCGCCGCGAGGACCACCTCGCGCTCGCCGTCTGGGGCGCCTACGAATTGCGCGAGT
TCTGGCGCGACCGCGGACAGGGCGCCTGA

Upstream 100 bases:

>100_bases
ATGATTCCGGAAGCAACGATGCCGTAAGATCCGGCGCGGTAAAATCCATGCCCGGATTTTACGCGATGGCCCGGCTGCTT
TTCCTACCACGAGCCCACAC

Downstream 100 bases:

>100_bases
ACCACGTCGTCCCGTACCCCGAATCTTGTAACCTACCGCTGATGAAACTCGTCCTTTTCGACCTCGACAACACGCTGCTC
GCCGGCGATTCCGATTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Sec-C Motif Domain Protein; YecA Family Protein; SEC-C Motif Domain Protein; Preprotein Translocase SecA Subunit

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPTPNTPPAPLSDAEVDELADLIDLLDERTDVPISLEGVDGFITALACSPRAIPDTEYLPVLLDRDEGLASVYENEADER
RFLALFARRRDEVARALAAPIENLADPRALSPLVMDWEALLADLPKDEATRLRAAGVPPYAQMWAAGFLLAVEHWEDDWT
LPGGSKDEAFVDEVLDPFYILAAPLEELSAEERDTRREDHLALAVWGAYELREFWRDRGQGA

Sequences:

>Translated_222_residues
MPTPNTPPAPLSDAEVDELADLIDLLDERTDVPISLEGVDGFITALACSPRAIPDTEYLPVLLDRDEGLASVYENEADER
RFLALFARRRDEVARALAAPIENLADPRALSPLVMDWEALLADLPKDEATRLRAAGVPPYAQMWAAGFLLAVEHWEDDWT
LPGGSKDEAFVDEVLDPFYILAAPLEELSAEERDTRREDHLALAVWGAYELREFWRDRGQGA
>Mature_221_residues
PTPNTPPAPLSDAEVDELADLIDLLDERTDVPISLEGVDGFITALACSPRAIPDTEYLPVLLDRDEGLASVYENEADERR
FLALFARRRDEVARALAAPIENLADPRALSPLVMDWEALLADLPKDEATRLRAAGVPPYAQMWAAGFLLAVEHWEDDWTL
PGGSKDEAFVDEVLDPFYILAAPLEELSAEERDTRREDHLALAVWGAYELREFWRDRGQGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24739; Mature: 24608

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPNTPPAPLSDAEVDELADLIDLLDERTDVPISLEGVDGFITALACSPRAIPDTEYLP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCE
VLLDRDEGLASVYENEADERRFLALFARRRDEVARALAAPIENLADPRALSPLVMDWEAL
EEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHH
LADLPKDEATRLRAAGVPPYAQMWAAGFLLAVEHWEDDWTLPGGSKDEAFVDEVLDPFYI
HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHH
LAAPLEELSAEERDTRREDHLALAVWGAYELREFWRDRGQGA
HHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTPNTPPAPLSDAEVDELADLIDLLDERTDVPISLEGVDGFITALACSPRAIPDTEYLP
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCE
VLLDRDEGLASVYENEADERRFLALFARRRDEVARALAAPIENLADPRALSPLVMDWEAL
EEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHH
LADLPKDEATRLRAAGVPPYAQMWAAGFLLAVEHWEDDWTLPGGSKDEAFVDEVLDPFYI
HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHH
LAAPLEELSAEERDTRREDHLALAVWGAYELREFWRDRGQGA
HHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA