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The map label for this gene is ygaF [H]

Identifier: 74318024

GI number: 74318024

Start: 2093763

End: 2094332

Strand: Direct

Name: ygaF [H]

Synonym: Tbd_2006

Alternate gene names: 74318024

Gene position: 2093763-2094332 (Clockwise)

Preceding gene: 74318018

Following gene: 74318028

Centisome position: 71.96

GC content: 70.0

Gene sequence:

>570_bases
ATGCTGACGCTGACACTGGGACTGCTCGCCGGACTGTTGCTGCTCGCAAGTGCGGTGATGTGGATGAGGCGTCCGCGCGG
GCAGGCGGTCGAGGGCGGCGCGGCCCCAGACTTTGCGCTGCGCGACCAAAACGGCCTGACGCGAAGCCTCGGCGACTACG
CGGGGCGCTGGCTCGTACTTTACTTCTACCCACGCGACGACACGCCGCACTGCACGCGCGAGGCATGCGCGTTTCGGGAC
GCGCGGGCGACGCTCGAAGAACGCGGCGCCTCCGTGCTCGGAATCAGCGTCGACACCTCCGCTCGCCACGCCGACTTCGC
GCGCAAACACGATCTGACGTTTCCGCTGCTCGCAGACACCGAGGGCGGGATCGCCCGCGCCTACGGCAGTGCGCTCGATC
TCGGATTCACCCGGCTGGCACGGCGCAAGACCTTCATCATCGCGCCGGACGGGCGCATCGCGGCCCGCTTCGATGCGGTC
GACGTCGCCACGCACGCCGACGAGGTGACGCGGACCCTCGACGCGCTGCGGCGCGCCTGGTCGTACCCCACGGCACCACC
AGCGCGTTGA

Upstream 100 bases:

>100_bases
CCACTGAGCTACCGGGGCGTGGCGCGCATTCTACCGAATCCCGCATCGATCGCCGAACGCGCGCGACCCCACGCGCTATG
ATGCGCGCGGAGGACGGAAC

Downstream 100 bases:

>100_bases
ATCAACCAAGGCGGGCAGCCTTGAGTGGGTTACGGTTCCAGGCCCTCGCTGCCGGCCTTGAAGACGGCATCCTGCCGCTC
GCGCCTCGCCCGGCCGCCCC

Product: peroxiredoxin-like protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLTLTLGLLAGLLLLASAVMWMRRPRGQAVEGGAAPDFALRDQNGLTRSLGDYAGRWLVLYFYPRDDTPHCTREACAFRD
ARATLEERGASVLGISVDTSARHADFARKHDLTFPLLADTEGGIARAYGSALDLGFTRLARRKTFIIAPDGRIAARFDAV
DVATHADEVTRTLDALRRAWSYPTAPPAR

Sequences:

>Translated_189_residues
MLTLTLGLLAGLLLLASAVMWMRRPRGQAVEGGAAPDFALRDQNGLTRSLGDYAGRWLVLYFYPRDDTPHCTREACAFRD
ARATLEERGASVLGISVDTSARHADFARKHDLTFPLLADTEGGIARAYGSALDLGFTRLARRKTFIIAPDGRIAARFDAV
DVATHADEVTRTLDALRRAWSYPTAPPAR
>Mature_189_residues
MLTLTLGLLAGLLLLASAVMWMRRPRGQAVEGGAAPDFALRDQNGLTRSLGDYAGRWLVLYFYPRDDTPHCTREACAFRD
ARATLEERGASVLGISVDTSARHADFARKHDLTFPLLADTEGGIARAYGSALDLGFTRLARRKTFIIAPDGRIAARFDAV
DVATHADEVTRTLDALRRAWSYPTAPPAR

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=36.3013698630137, Blast_Score=97, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI193204376, Length=179, Percent_Identity=32.4022346368715, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17738015, Length=166, Percent_Identity=33.1325301204819, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 20688; Mature: 20688

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLTLGLLAGLLLLASAVMWMRRPRGQAVEGGAAPDFALRDQNGLTRSLGDYAGRWLVL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEE
YFYPRDDTPHCTREACAFRDARATLEERGASVLGISVDTSARHADFARKHDLTFPLLADT
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECC
EGGIARAYGSALDLGFTRLARRKTFIIAPDGRIAARFDAVDVATHADEVTRTLDALRRAW
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
SYPTAPPAR
CCCCCCCCC
>Mature Secondary Structure
MLTLTLGLLAGLLLLASAVMWMRRPRGQAVEGGAAPDFALRDQNGLTRSLGDYAGRWLVL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEE
YFYPRDDTPHCTREACAFRDARATLEERGASVLGISVDTSARHADFARKHDLTFPLLADT
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECC
EGGIARAYGSALDLGFTRLARRKTFIIAPDGRIAARFDAVDVATHADEVTRTLDALRRAW
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
SYPTAPPAR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]