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The map label for this gene is capD [H]

Identifier: 74317889

GI number: 74317889

Start: 1967090

End: 1968934

Strand: Reverse

Name: capD [H]

Synonym: Tbd_1871

Alternate gene names: 74317889

Gene position: 1968934-1967090 (Counterclockwise)

Preceding gene: 74317890

Following gene: 74317888

Centisome position: 67.67

GC content: 66.45

Gene sequence:

>1845_bases
ATGAAGTTTAATTCGCGCACCCTCGTCATCATCGTCTACGACATCCTGGTGGCGGCGTTCGCCTGGCTTGGCGCCTACTG
GCTGCGCTTCAATCTCGACGTGCCGCCGGAGTTCGAGACCGCCGCGCTCGCGACGCTGATCTGGGTTGTGCCGCTGCAAG
CCGTCGTATTCTGGCGCTTCGGCCTGTATCGCGGTATCTGGCGCTTCGCGAGCTTGCCCGACCTCAAGCGTATCGTGCTC
GCTGCGGGCCTAGCGGCGCTGCTGATCCCTGTTGCGTTGGTGCTCTTTCGCGTCCACGCCATCGTTCCGCGTTCGGTGCT
GATTCTCGACCCGCTGCTGCTGGTCATGGTGATGGGCGGCAGCCGGCTCGCCTACCGCGCGTGGAAGGAGCACCGGCTCG
CGAGCGTGCTGCGCCCCGACAGCAAACCTGTGCTGGTGGCGGGTGCGGGCTCGGCGGCCGACTTCCTGCTCCGCGAACTC
GCGCGCAACCCGGCGGGCTTCCATGTCGTTGGCCTGCTCGACGACAGCCGCGAGAAGCAGGGGCGGCTCGTTCAGGGGGT
GCCGGTTCTCGGCGTGCTCGACGATGCCGCGGTGGTCGCGAAGCGCTTGGGCGTCGACGACGTCGTCCTTGCGCTGCCTT
CAGCCGCGCACGAGATCCGCAAGCGCATCACCGAGGCGTGCACCGGCGCAGGTCTCAACGTGATGACCGTTCCTTCGCTC
GAAGATCTGGTGGGCGGCCGCGTTTCGGTGTCGAGCCTGCGGCGCATCGAGCTCGACGACCTCCTCGGACGCGATCCCGT
GCAGCTCGACGACAGCGGCCTGCATGGCTTGCTGACGGGGCAGGTGGTCATGGTGACCGGCGCGGGTGGCTCGATCGGCG
CCGAGCTCTGCCGGCAGATCGCGCGCTTCGCACCGGCCAAGCTCGTGCTGTTCGAGCAGTCCGAGCTCGCGCTGTACGCG
ATGGAGCAGGAGCTGCCGCGCCGCCATCCGGAACTGGCAGTCGTGCCGGTGATCGGCGACGCCAAGAACGCTGCGTGGGT
CAATCGCGTCATGGAGATGCATCGGCCGGCGATCGTCTTCCACGCCGCGGCGTATAAGCACGTTCCGCTGATGGAGAACG
GCAACGCCTGGGAAGCGGTGAAGAACAACGTGCTCGGCACGCAGGTCGTCGCCGCGGCGGCGCAGGTGCATGGCGTCGGA
AAGTTCGTGTTGATTTCGACCGACAAGGCCGTCAATCCGACCAACGTGATGGGTGCGAGCAAGCGCCTTGCCGAGATGGC
GTGTCAGGCGATGCAACAGCGCGCCGGCGATGCCCCGACCGGTACGCGTTTCGTATCGGTGCGGTTCGGCAACGTGCTCG
GATCGTCGGGCAGCGTCATCCCAAAGTTTCAGAAGCAGATCGAAGCGGGCGGACCGGTGACGGTCACGCATCCCGAAATC
ACCCGCTACTTCATGTCGATTCCGGAAGCCGCGCAGCTCGTCCTGCAGGCAGGCCTGATGGGTAAAGGCGGCGAAATCTT
CGTGCTCGACATGGGCGAGCCCGTGAAGATCGCCGAGCTTGCGAAGCTCATGATCCGGCTGTCGGGCGCGGACGAAGCGC
GCATACGCATCGAGTACACCGGCCTGCGCCCGGGCGAGAAGCTCTACGAGGAGCTGCTCGCGGACGACGAATCGACGCTT
CCGACCCCGCATCCGAAGCTGCGCGTCGCCAAGGCGCGGCCCGCAGACCCGGGCTGGCATGCCGAATGCCTCGACTGGCT
CGCGTATCCGGATAGCTACGACGAGGCCACGGTCAAGCGCCAGCTCAAGACCTGGGTGCCGGAATACCAGCCGGAATCCG
CGTGA

Upstream 100 bases:

>100_bases
CGGTCGTTTCCGCAACAGGCGACCGCGCTGCTTATACTGTCGGCCGCAATCTACCTGCTGATTTTTTTTGCCATCGACCG
GCGCTGGCGTCTGGCCCGTA

Downstream 100 bases:

>100_bases
AGCCCGTCCACCTCAGTGAAATTCGCCGCGTGCTCGTCATCAAATGGAGCGCGCTCGGCGACGTGGTCATCGCGAGCGCG
TTGATGGAGGACGTCGCGCG

Product: putative epimerase/dehydratase-like biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MKFNSRTLVIIVYDILVAAFAWLGAYWLRFNLDVPPEFETAALATLIWVVPLQAVVFWRFGLYRGIWRFASLPDLKRIVL
AAGLAALLIPVALVLFRVHAIVPRSVLILDPLLLVMVMGGSRLAYRAWKEHRLASVLRPDSKPVLVAGAGSAADFLLREL
ARNPAGFHVVGLLDDSREKQGRLVQGVPVLGVLDDAAVVAKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNVMTVPSL
EDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGAELCRQIARFAPAKLVLFEQSELALYA
MEQELPRRHPELAVVPVIGDAKNAAWVNRVMEMHRPAIVFHAAAYKHVPLMENGNAWEAVKNNVLGTQVVAAAAQVHGVG
KFVLISTDKAVNPTNVMGASKRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPVTVTHPEI
TRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEARIRIEYTGLRPGEKLYEELLADDESTL
PTPHPKLRVAKARPADPGWHAECLDWLAYPDSYDEATVKRQLKTWVPEYQPESA

Sequences:

>Translated_614_residues
MKFNSRTLVIIVYDILVAAFAWLGAYWLRFNLDVPPEFETAALATLIWVVPLQAVVFWRFGLYRGIWRFASLPDLKRIVL
AAGLAALLIPVALVLFRVHAIVPRSVLILDPLLLVMVMGGSRLAYRAWKEHRLASVLRPDSKPVLVAGAGSAADFLLREL
ARNPAGFHVVGLLDDSREKQGRLVQGVPVLGVLDDAAVVAKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNVMTVPSL
EDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGAELCRQIARFAPAKLVLFEQSELALYA
MEQELPRRHPELAVVPVIGDAKNAAWVNRVMEMHRPAIVFHAAAYKHVPLMENGNAWEAVKNNVLGTQVVAAAAQVHGVG
KFVLISTDKAVNPTNVMGASKRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPVTVTHPEI
TRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEARIRIEYTGLRPGEKLYEELLADDESTL
PTPHPKLRVAKARPADPGWHAECLDWLAYPDSYDEATVKRQLKTWVPEYQPESA
>Mature_614_residues
MKFNSRTLVIIVYDILVAAFAWLGAYWLRFNLDVPPEFETAALATLIWVVPLQAVVFWRFGLYRGIWRFASLPDLKRIVL
AAGLAALLIPVALVLFRVHAIVPRSVLILDPLLLVMVMGGSRLAYRAWKEHRLASVLRPDSKPVLVAGAGSAADFLLREL
ARNPAGFHVVGLLDDSREKQGRLVQGVPVLGVLDDAAVVAKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNVMTVPSL
EDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGAELCRQIARFAPAKLVLFEQSELALYA
MEQELPRRHPELAVVPVIGDAKNAAWVNRVMEMHRPAIVFHAAAYKHVPLMENGNAWEAVKNNVLGTQVVAAAAQVHGVG
KFVLISTDKAVNPTNVMGASKRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPVTVTHPEI
TRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEARIRIEYTGLRPGEKLYEELLADDESTL
PTPHPKLRVAKARPADPGWHAECLDWLAYPDSYDEATVKRQLKTWVPEYQPESA

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 66765; Mature: 66765

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNSRTLVIIVYDILVAAFAWLGAYWLRFNLDVPPEFETAALATLIWVVPLQAVVFWRF
CCCCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLYRGIWRFASLPDLKRIVLAAGLAALLIPVALVLFRVHAIVPRSVLILDPLLLVMVMGG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
SRLAYRAWKEHRLASVLRPDSKPVLVAGAGSAADFLLRELARNPAGFHVVGLLDDSREKQ
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCHHC
GRLVQGVPVLGVLDDAAVVAKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNVMTVPSL
CCEECCCCEEEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCH
EDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGAELCRQI
HHHCCCCEEHHHHHHCCHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHH
ARFAPAKLVLFEQSELALYAMEQELPRRHPELAVVPVIGDAKNAAWVNRVMEMHRPAIVF
HHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEE
HAAAYKHVPLMENGNAWEAVKNNVLGTQVVAAAAQVHGVGKFVLISTDKAVNPTNVMGAS
EEHHHCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
KRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPVTVTHPEI
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECHHH
TRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEARIRIEYT
HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEE
GLRPGEKLYEELLADDESTLPTPHPKLRVAKARPADPGWHAECLDWLAYPDSYDEATVKR
CCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHH
QLKTWVPEYQPESA
HHHHHCCCCCCCCC
>Mature Secondary Structure
MKFNSRTLVIIVYDILVAAFAWLGAYWLRFNLDVPPEFETAALATLIWVVPLQAVVFWRF
CCCCCCEEEEEHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLYRGIWRFASLPDLKRIVLAAGLAALLIPVALVLFRVHAIVPRSVLILDPLLLVMVMGG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
SRLAYRAWKEHRLASVLRPDSKPVLVAGAGSAADFLLRELARNPAGFHVVGLLDDSREKQ
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCHHC
GRLVQGVPVLGVLDDAAVVAKRLGVDDVVLALPSAAHEIRKRITEACTGAGLNVMTVPSL
CCEECCCCEEEECCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCH
EDLVGGRVSVSSLRRIELDDLLGRDPVQLDDSGLHGLLTGQVVMVTGAGGSIGAELCRQI
HHHCCCCEEHHHHHHCCHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHH
ARFAPAKLVLFEQSELALYAMEQELPRRHPELAVVPVIGDAKNAAWVNRVMEMHRPAIVF
HHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEE
HAAAYKHVPLMENGNAWEAVKNNVLGTQVVAAAAQVHGVGKFVLISTDKAVNPTNVMGAS
EEHHHCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
KRLAEMACQAMQQRAGDAPTGTRFVSVRFGNVLGSSGSVIPKFQKQIEAGGPVTVTHPEI
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECHHH
TRYFMSIPEAAQLVLQAGLMGKGGEIFVLDMGEPVKIAELAKLMIRLSGADEARIRIEYT
HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEE
GLRPGEKLYEELLADDESTLPTPHPKLRVAKARPADPGWHAECLDWLAYPDSYDEATVKR
CCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHH
QLKTWVPEYQPESA
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]