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The map label for this gene is rfaQ [H]

Identifier: 74317888

GI number: 74317888

Start: 1966002

End: 1967060

Strand: Reverse

Name: rfaQ [H]

Synonym: Tbd_1870

Alternate gene names: 74317888

Gene position: 1967060-1966002 (Counterclockwise)

Preceding gene: 74317889

Following gene: 74317887

Centisome position: 67.6

GC content: 67.8

Gene sequence:

>1059_bases
GTGCTCGTCATCAAATGGAGCGCGCTCGGCGACGTGGTCATCGCGAGCGCGTTGATGGAGGACGTCGCGCGCGCCTTCCC
CAGTGCCGAAATCGATCTCAACACCCAGCCCAACTGCGCCGGACTTTTTGCGCACGACCCGCGCTTCTCGGAGGTCTGGG
CGATCGACGTGCGCAGCAAGACGCGGCGCTGGGCCAATAGCCTCGCGTGGATTAAAAAAGTTCGGCAAGGGCGATACGAC
CTCGTGATCGACCTGCAGGCTTCCGATCATTCGCGCCTGCTGCTCGCGCTGCTGTGGCTGACCGGCGGTGCGCCGCGCGT
GCGCATCGGCAATCGCGGCGGTTTTCCGTACACGCATCAACCCGCGATCCGCAAGTCGGGCGCCCACGCGCTGCCGATGA
TGCAGTCGGTGCTCGAGTCGATCGGGATACCCGCGCGCACGACGCGCCCGGTGCTCCACCCGCCGCCCGAGCGGCTCGCG
GCCGTCGACGCGCTGCGGTCCCGGCATGGGCTCGGCGACGGCGACTACGTTGTGCTGCTGCCGGGATCGAACGCGTCGGG
GAAGCTCAAGCGCTGGGGGGCGGCGCGTTTCGCGGAACTCGCGCGCCTGCTTCACGCCGAGGGCGTCGCGAAAATCGTCG
TGATCGGCGGGCCGGACGAAGTGGATGAATGTGAGGAGATCGCGCGCGCGGGCGACTATGTGCTGAACCTCAACGGACAG
CTTCAGTTGTTCGACATCGCGCCGCTGTGCAGCGGCGCCTCGGCGATCGTCGGCAATGATACCGGCACGGCGCATTTCGC
CTCGGCCGCGGGGCGCCCCTTGCTGGTCATATGCGGCCCTACCGACCCGCGCCGCGTCAAGCCGATCGGTGCCGGCACCG
TCGCCGTGCAGGCCGTGCTGCCCTGCATCAACTGCTACGCCAAGACCTGCCGCAACCCCGACTTTCATGCGTGCATGAAG
ACTATTACGCCAGCCTGGATCGCGGCGCGCATGCCTGAGCTCGACGCAGGCGAACTCGCTGCCGGTCGCGACTGGCCGGA
AGGCCTGCGCAGCTTCTGA

Upstream 100 bases:

>100_bases
GCTACGACGAGGCCACGGTCAAGCGCCAGCTCAAGACCTGGGTGCCGGAATACCAGCCGGAATCCGCGTGAAGCCCGTCC
ACCTCAGTGAAATTCGCCGC

Downstream 100 bases:

>100_bases
TGGCGCCGAAGCCTGCTCCGCCGCTGCGCGTGAAGGTTTTGAGCAGCCTGCCTGCGGCGGCGTGGCTGCACCAGCTGCCG
CACGCCACCCCGGCCTGGGA

Product: heptosyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLVIKWSALGDVVIASALMEDVARAFPSAEIDLNTQPNCAGLFAHDPRFSEVWAIDVRSKTRRWANSLAWIKKVRQGRYD
LVIDLQASDHSRLLLALLWLTGGAPRVRIGNRGGFPYTHQPAIRKSGAHALPMMQSVLESIGIPARTTRPVLHPPPERLA
AVDALRSRHGLGDGDYVVLLPGSNASGKLKRWGAARFAELARLLHAEGVAKIVVIGGPDEVDECEEIARAGDYVLNLNGQ
LQLFDIAPLCSGASAIVGNDTGTAHFASAAGRPLLVICGPTDPRRVKPIGAGTVAVQAVLPCINCYAKTCRNPDFHACMK
TITPAWIAARMPELDAGELAAGRDWPEGLRSF

Sequences:

>Translated_352_residues
MLVIKWSALGDVVIASALMEDVARAFPSAEIDLNTQPNCAGLFAHDPRFSEVWAIDVRSKTRRWANSLAWIKKVRQGRYD
LVIDLQASDHSRLLLALLWLTGGAPRVRIGNRGGFPYTHQPAIRKSGAHALPMMQSVLESIGIPARTTRPVLHPPPERLA
AVDALRSRHGLGDGDYVVLLPGSNASGKLKRWGAARFAELARLLHAEGVAKIVVIGGPDEVDECEEIARAGDYVLNLNGQ
LQLFDIAPLCSGASAIVGNDTGTAHFASAAGRPLLVICGPTDPRRVKPIGAGTVAVQAVLPCINCYAKTCRNPDFHACMK
TITPAWIAARMPELDAGELAAGRDWPEGLRSF
>Mature_352_residues
MLVIKWSALGDVVIASALMEDVARAFPSAEIDLNTQPNCAGLFAHDPRFSEVWAIDVRSKTRRWANSLAWIKKVRQGRYD
LVIDLQASDHSRLLLALLWLTGGAPRVRIGNRGGFPYTHQPAIRKSGAHALPMMQSVLESIGIPARTTRPVLHPPPERLA
AVDALRSRHGLGDGDYVVLLPGSNASGKLKRWGAARFAELARLLHAEGVAKIVVIGGPDEVDECEEIARAGDYVLNLNGQ
LQLFDIAPLCSGASAIVGNDTGTAHFASAAGRPLLVICGPTDPRRVKPIGAGTVAVQAVLPCINCYAKTCRNPDFHACMK
TITPAWIAARMPELDAGELAAGRDWPEGLRSF

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=288, Percent_Identity=25, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37875; Mature: 37875

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIKWSALGDVVIASALMEDVARAFPSAEIDLNTQPNCAGLFAHDPRFSEVWAIDVRSK
CEEEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEEEEEECHHH
TRRWANSLAWIKKVRQGRYDLVIDLQASDHSRLLLALLWLTGGAPRVRIGNRGGFPYTHQ
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
PAIRKSGAHALPMMQSVLESIGIPARTTRPVLHPPPERLAAVDALRSRHGLGDGDYVVLL
CHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
PGSNASGKLKRWGAARFAELARLLHAEGVAKIVVIGGPDEVDECEEIARAGDYVLNLNGQ
ECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCC
LQLFDIAPLCSGASAIVGNDTGTAHFASAAGRPLLVICGPTDPRRVKPIGAGTVAVQAVL
EEEEEECCCCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCCCCEECCCCCHHHHHHHHH
PCINCYAKTCRNPDFHACMKTITPAWIAARMPELDAGELAAGRDWPEGLRSF
HHHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MLVIKWSALGDVVIASALMEDVARAFPSAEIDLNTQPNCAGLFAHDPRFSEVWAIDVRSK
CEEEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCEEEEEECHHH
TRRWANSLAWIKKVRQGRYDLVIDLQASDHSRLLLALLWLTGGAPRVRIGNRGGFPYTHQ
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
PAIRKSGAHALPMMQSVLESIGIPARTTRPVLHPPPERLAAVDALRSRHGLGDGDYVVLL
CHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
PGSNASGKLKRWGAARFAELARLLHAEGVAKIVVIGGPDEVDECEEIARAGDYVLNLNGQ
ECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCC
LQLFDIAPLCSGASAIVGNDTGTAHFASAAGRPLLVICGPTDPRRVKPIGAGTVAVQAVL
EEEEEECCCCCCCCEEEECCCCCCHHHHCCCCEEEEEECCCCCCEECCCCCHHHHHHHHH
PCINCYAKTCRNPDFHACMKTITPAWIAARMPELDAGELAAGRDWPEGLRSF
HHHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA