| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317887
Identifier: 74317887
GI number: 74317887
Start: 1964935
End: 1966002
Strand: Reverse
Name: 74317887
Synonym: Tbd_1869
Alternate gene names: NA
Gene position: 1966002-1964935 (Counterclockwise)
Preceding gene: 74317888
Following gene: 74317883
Centisome position: 67.56
GC content: 65.73
Gene sequence:
>1068_bases ATGGCGCCGAAGCCTGCTCCGCCGCTGCGCGTGAAGGTTTTGAGCAGCCTGCCTGCGGCGGCGTGGCTGCACCAGCTGCC GCACGCCACCCCGGCCTGGGAGGGCTGCGAATTCGTCTTCGAGCGCGATGCGCGCGATTACGACTGGCTGGTCGTCTACG ACGATCTACCCGCCCGTCCGGGCGAAGCGAAGAAGACCACGTTCGAGGAACTTGCGTGTCCGCGCGCGCATACATTGCTC GTGACGACCGAGCCGTCCTCGGTGAAGATCTACGGCGACGACTTCACGGCCCAGTTCGGCGCAGTGCTCACGAGTCAGCC CGACTGGGCGCTGCCGCATGGCCAGCGGATGTTCGGGCAGCCGGCGCTGCACTGGTTCTACGGGATCGGGCGCGACGAGA CCGAGTCGTTCGACCATATGCTGGAGCATCCGCCGGCGGAGAAAACGCGCGACACCTCGATGGTCTATTCGCCCAAGGCC ATGCGCCATACCCTGCATCATCGTCGCGCGCGCTTCATGCATTGGCTCGTCGCGCACATGCCCGAGCTCGACGTGTTCGG CCGGGGGACTGCGCGTGCGCTCGACGACAAGGCAGACTGCCTGCGCAGCTACCGCTACCACGTCGCAATTGAAAATTTTG TCGGCGTGCACCACTGGACGGAGAAGCTCGCCGACCCCTTTCTCGGGCTGACGCTGCCGTTCTATTACGGCTGCCCGAAC GCCGAGGAATACTTTCCGCACGAGAGCTTCATCCGCATCGACATCGACGACCCGGCCGGGGCGCTGCACACCATTCGCAG CGCGATCGCCAACGACGAGTACGGCAAACGCCTTCCGGCCCTGCTCGAAGCGAGGCGACGCGTGATGTTCGAGCATAACT TCTTCGCTGTGATGGCCCGCGCGATCGCGCGTCTTCATCGTCCGGACACGGCCATCGAATGTGGCGCGAATATCTTGTCG CGGCGGGCGTTGCGGCTGTCGAGCCCGGTCGTCGCCTTGCGCGACCTGTACGGCAAGCTGCGCGGGCGGTTGCTGCATCT GCCCGCGGCGCTGCGCGGGCGAAGCTAA
Upstream 100 bases:
>100_bases AGACTATTACGCCAGCCTGGATCGCGGCGCGCATGCCTGAGCTCGACGCAGGCGAACTCGCTGCCGGTCGCGACTGGCCG GAAGGCCTGCGCAGCTTCTG
Downstream 100 bases:
>100_bases CGCCGCGGCGCCCGCGCGAGCTGTTCGTAGAGCGCGAGCGTGCGCTCGATCATCGCCTTCAACGGAAAGAAGTCGCCCTC AGGCACCGCGTCGGGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Methyltransferase FkbM Family; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MAPKPAPPLRVKVLSSLPAAAWLHQLPHATPAWEGCEFVFERDARDYDWLVVYDDLPARPGEAKKTTFEELACPRAHTLL VTTEPSSVKIYGDDFTAQFGAVLTSQPDWALPHGQRMFGQPALHWFYGIGRDETESFDHMLEHPPAEKTRDTSMVYSPKA MRHTLHHRRARFMHWLVAHMPELDVFGRGTARALDDKADCLRSYRYHVAIENFVGVHHWTEKLADPFLGLTLPFYYGCPN AEEYFPHESFIRIDIDDPAGALHTIRSAIANDEYGKRLPALLEARRRVMFEHNFFAVMARAIARLHRPDTAIECGANILS RRALRLSSPVVALRDLYGKLRGRLLHLPAALRGRS
Sequences:
>Translated_355_residues MAPKPAPPLRVKVLSSLPAAAWLHQLPHATPAWEGCEFVFERDARDYDWLVVYDDLPARPGEAKKTTFEELACPRAHTLL VTTEPSSVKIYGDDFTAQFGAVLTSQPDWALPHGQRMFGQPALHWFYGIGRDETESFDHMLEHPPAEKTRDTSMVYSPKA MRHTLHHRRARFMHWLVAHMPELDVFGRGTARALDDKADCLRSYRYHVAIENFVGVHHWTEKLADPFLGLTLPFYYGCPN AEEYFPHESFIRIDIDDPAGALHTIRSAIANDEYGKRLPALLEARRRVMFEHNFFAVMARAIARLHRPDTAIECGANILS RRALRLSSPVVALRDLYGKLRGRLLHLPAALRGRS >Mature_354_residues APKPAPPLRVKVLSSLPAAAWLHQLPHATPAWEGCEFVFERDARDYDWLVVYDDLPARPGEAKKTTFEELACPRAHTLLV TTEPSSVKIYGDDFTAQFGAVLTSQPDWALPHGQRMFGQPALHWFYGIGRDETESFDHMLEHPPAEKTRDTSMVYSPKAM RHTLHHRRARFMHWLVAHMPELDVFGRGTARALDDKADCLRSYRYHVAIENFVGVHHWTEKLADPFLGLTLPFYYGCPNA EEYFPHESFIRIDIDDPAGALHTIRSAIANDEYGKRLPALLEARRRVMFEHNFFAVMARAIARLHRPDTAIECGANILSR RALRLSSPVVALRDLYGKLRGRLLHLPAALRGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40433; Mature: 40301
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKPAPPLRVKVLSSLPAAAWLHQLPHATPAWEGCEFVFERDARDYDWLVVYDDLPARP CCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCC GEAKKTTFEELACPRAHTLLVTTEPSSVKIYGDDFTAQFGAVLTSQPDWALPHGQRMFGQ CCCHHHHHHHHCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCC PALHWFYGIGRDETESFDHMLEHPPAEKTRDTSMVYSPKAMRHTLHHRRARFMHWLVAHM HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC PELDVFGRGTARALDDKADCLRSYRYHVAIENFVGVHHWTEKLADPFLGLTLPFYYGCPN CCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC AEEYFPHESFIRIDIDDPAGALHTIRSAIANDEYGKRLPALLEARRRVMFEHNFFAVMAR HHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIARLHRPDTAIECGANILSRRALRLSSPVVALRDLYGKLRGRLLHLPAALRGRS HHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCHHHCCCC >Mature Secondary Structure APKPAPPLRVKVLSSLPAAAWLHQLPHATPAWEGCEFVFERDARDYDWLVVYDDLPARP CCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCC GEAKKTTFEELACPRAHTLLVTTEPSSVKIYGDDFTAQFGAVLTSQPDWALPHGQRMFGQ CCCHHHHHHHHCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHCC PALHWFYGIGRDETESFDHMLEHPPAEKTRDTSMVYSPKAMRHTLHHRRARFMHWLVAHM HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC PELDVFGRGTARALDDKADCLRSYRYHVAIENFVGVHHWTEKLADPFLGLTLPFYYGCPN CCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC AEEYFPHESFIRIDIDDPAGALHTIRSAIANDEYGKRLPALLEARRRVMFEHNFFAVMAR HHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIARLHRPDTAIECGANILSRRALRLSSPVVALRDLYGKLRGRLLHLPAALRGRS HHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA