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The map label for this gene is ppdD [C]

Identifier: 74317883

GI number: 74317883

Start: 1960927

End: 1961331

Strand: Reverse

Name: ppdD [C]

Synonym: Tbd_1865

Alternate gene names: 74317883

Gene position: 1961331-1960927 (Counterclockwise)

Preceding gene: 74317887

Following gene: 74317882

Centisome position: 67.4

GC content: 60.74

Gene sequence:

>405_bases
ATGAAGTCGGGAAGACAAAACGGATTCACGTTGATCGAACTGATGATTACGGTGGCGATCGTCGGCATTCTGGCGTCGAT
CGCCTATCCGGGGTATCAGAAATACATGCTCTCGGCGCGCCGTGCCGACGCGCAGGCCGACCTGCTCAAGATACAGCTCG
GGCTCGAGAAGTGGCGGGCGAATCACAACACCTACTCGAGCAACCTCGCTGACGCCGGTTTTTCCGACAACAATCCCTAT
TACGGCTACAGCATCACGGTCGGCAGCGCCACCGCCACCAGCGCCAGCGCCTATACCGTCACGGCGACCGCCACCGGCGC
CCAGGCCAACGACAGCGGCTGTACGTCGCTCGCGATCAACCAGAGCGGCAACAAAACACCCGCTTCGGGCTGCTGGACGA
AATAG

Upstream 100 bases:

>100_bases
CGATTACCCGCTTGGCGGGCCAAAGACGCCGGCCATCGGTTATCCGTGGCAGCTGCCCCGGACAGGAGTTAGGGTGCAAA
CACGTGAAAAGGGACGAGAC

Downstream 100 bases:

>100_bases
GGCCACGACATGAGACCGCTCCCCGGGCCGAAGGGCTTCACCCTCGTGGAAATGGTGATTGTCGTCGCGATTCTCGCGAT
CCTGCTCACGATGGCCGCAC

Product: pilus assembly protein

Products: NA

Alternate protein names: Type IV Pilin; Type 4 Fimbrial Biogenesis Protein PilE; Type IV Pilus Biogenesis Protein PilE; Pilus Assembly Protein; Type 4 Fimbrial Biogenesis Transmembrane Protein; Prepilin-Type Cleavage/Methylation; Fimbrial Protein Pilin; Secretion Protein; Tfp Pilus Assembly Protein PilE-Like Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKSGRQNGFTLIELMITVAIVGILASIAYPGYQKYMLSARRADAQADLLKIQLGLEKWRANHNTYSSNLADAGFSDNNPY
YGYSITVGSATATSASAYTVTATATGAQANDSGCTSLAINQSGNKTPASGCWTK

Sequences:

>Translated_134_residues
MKSGRQNGFTLIELMITVAIVGILASIAYPGYQKYMLSARRADAQADLLKIQLGLEKWRANHNTYSSNLADAGFSDNNPY
YGYSITVGSATATSASAYTVTATATGAQANDSGCTSLAINQSGNKTPASGCWTK
>Mature_134_residues
MKSGRQNGFTLIELMITVAIVGILASIAYPGYQKYMLSARRADAQADLLKIQLGLEKWRANHNTYSSNLADAGFSDNNPY
YGYSITVGSATATSASAYTVTATATGAQANDSGCTSLAINQSGNKTPASGCWTK

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14115; Mature: 14115

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGRQNGFTLIELMITVAIVGILASIAYPGYQKYMLSARRADAQADLLKIQLGLEKWRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHEECHHHHHC
NHNTYSSNLADAGFSDNNPYYGYSITVGSATATSASAYTVTATATGAQANDSGCTSLAIN
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
QSGNKTPASGCWTK
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKSGRQNGFTLIELMITVAIVGILASIAYPGYQKYMLSARRADAQADLLKIQLGLEKWRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHEECHHHHHC
NHNTYSSNLADAGFSDNNPYYGYSITVGSATATSASAYTVTATATGAQANDSGCTSLAIN
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
QSGNKTPASGCWTK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA