| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317829
Identifier: 74317829
GI number: 74317829
Start: 1913914
End: 1914840
Strand: Direct
Name: 74317829
Synonym: Tbd_1811
Alternate gene names: NA
Gene position: 1913914-1914840 (Clockwise)
Preceding gene: 74317828
Following gene: 74317830
Centisome position: 65.77
GC content: 62.35
Gene sequence:
>927_bases GTGGCGGACTTGCGAAGCGCGCTCCAGACCTTTAATAAGGAATGGAAATTCAGCAGCAAAGGTCCGCTGTGCGTGGCGCT GGTCATCACTCAGCACGCACGCAAGATGGGTTTGCCGCTCGATCCGGACAAGCTGCTGACTGATGCCGGCGGCCAAGTGC TCGGCCTCGGAAGAGCGGCCGTGCAAGCGGTCCTCAACCGCCACGGCATTACCCGTGTCCTGGCCGCCGAAGGCGGCCGG ACGAGCCGCGGCAGCATCAACAACATGCGTGAGTACGTCGGGTTTCTCAACGAGCTGATCCGCCCCGTGGATCTCGATGC CATTGAAGCCTACTGGATCGAGCGCGTGCACGAGTTCTTCGCGGCCAAGCCGTTCAAAATTCGCTTGGACGCTTCGCGTA GCCTGAGAACGCTGGTCCGGGATGTCATCGTCCAGGCCGATGAGCGGCAACGCAACACGCCGGGCATGCAGTACGCGGGC GCGGTGCTGCAACACCTGGTCGGCGCGAAACTGGATTGCGCCCTGGGCAATGGCTCATTCGGGCACAACAGCTTTTCCAC GTCGGACGCGCAATCGGGTCGCGCTGGCGACTTCTTCATCGGCGACGTTGCTGTCCATGTCACCACTGCCCCGGGCGAGG CCGTCGTCGAACGCTGCCGCGACAACATCAATGATGGCTTCCGGCCGATTATCGTAACCACGGCGCGCGGCCTGACGGCG GCCGAGGTCCTGGCCGAGAACGCCGGCCTAGGGGAGCGTATCGACGTTTTCGAGGTCGAGCAGTTCGTCGCCCTGAACCT GTACGAGTTAGGCAAGTTCGCAGCTGACGGCCGCCGCGTCGCGGTCGGCGATCTGGTGACGCGCTACAACGAAATCATTG AAGAAGTCGAAACCGATCCAAGCCTCAAGATCGAGTTTCGCCAATGA
Upstream 100 bases:
>100_bases CCGGCGACGGCGTGGCCGTGCCGGTGGTGCGCTTCTTGGCCGACAGCGTCCTAGAGCCGCTGCTGGCCGCCGCCCTTGCG ACCGAGAAGAAGGCGGCGTA
Downstream 100 bases:
>100_bases CCGAAACGCCGGAGCTGCGCAGCCGCACAATGCGAGCTGTGCGCTCCCGCGACACCACCCCCGAACTGGCCGTCCGCCGG CTTCTGCGCGGCATGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MADLRSALQTFNKEWKFSSKGPLCVALVITQHARKMGLPLDPDKLLTDAGGQVLGLGRAAVQAVLNRHGITRVLAAEGGR TSRGSINNMREYVGFLNELIRPVDLDAIEAYWIERVHEFFAAKPFKIRLDASRSLRTLVRDVIVQADERQRNTPGMQYAG AVLQHLVGAKLDCALGNGSFGHNSFSTSDAQSGRAGDFFIGDVAVHVTTAPGEAVVERCRDNINDGFRPIIVTTARGLTA AEVLAENAGLGERIDVFEVEQFVALNLYELGKFAADGRRVAVGDLVTRYNEIIEEVETDPSLKIEFRQ
Sequences:
>Translated_308_residues MADLRSALQTFNKEWKFSSKGPLCVALVITQHARKMGLPLDPDKLLTDAGGQVLGLGRAAVQAVLNRHGITRVLAAEGGR TSRGSINNMREYVGFLNELIRPVDLDAIEAYWIERVHEFFAAKPFKIRLDASRSLRTLVRDVIVQADERQRNTPGMQYAG AVLQHLVGAKLDCALGNGSFGHNSFSTSDAQSGRAGDFFIGDVAVHVTTAPGEAVVERCRDNINDGFRPIIVTTARGLTA AEVLAENAGLGERIDVFEVEQFVALNLYELGKFAADGRRVAVGDLVTRYNEIIEEVETDPSLKIEFRQ >Mature_307_residues ADLRSALQTFNKEWKFSSKGPLCVALVITQHARKMGLPLDPDKLLTDAGGQVLGLGRAAVQAVLNRHGITRVLAAEGGRT SRGSINNMREYVGFLNELIRPVDLDAIEAYWIERVHEFFAAKPFKIRLDASRSLRTLVRDVIVQADERQRNTPGMQYAGA VLQHLVGAKLDCALGNGSFGHNSFSTSDAQSGRAGDFFIGDVAVHVTTAPGEAVVERCRDNINDGFRPIIVTTARGLTAA EVLAENAGLGERIDVFEVEQFVALNLYELGKFAADGRRVAVGDLVTRYNEIIEEVETDPSLKIEFRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33723; Mature: 33592
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLRSALQTFNKEWKFSSKGPLCVALVITQHARKMGLPLDPDKLLTDAGGQVLGLGRAA CCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHH VQAVLNRHGITRVLAAEGGRTSRGSINNMREYVGFLNELIRPVDLDAIEAYWIERVHEFF HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AAKPFKIRLDASRSLRTLVRDVIVQADERQRNTPGMQYAGAVLQHLVGAKLDCALGNGSF CCCCEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC GHNSFSTSDAQSGRAGDFFIGDVAVHVTTAPGEAVVERCRDNINDGFRPIIVTTARGLTA CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCHH AEVLAENAGLGERIDVFEVEQFVALNLYELGKFAADGRRVAVGDLVTRYNEIIEEVETDP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCC SLKIEFRQ CEEEEECC >Mature Secondary Structure ADLRSALQTFNKEWKFSSKGPLCVALVITQHARKMGLPLDPDKLLTDAGGQVLGLGRAA CHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHH VQAVLNRHGITRVLAAEGGRTSRGSINNMREYVGFLNELIRPVDLDAIEAYWIERVHEFF HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AAKPFKIRLDASRSLRTLVRDVIVQADERQRNTPGMQYAGAVLQHLVGAKLDCALGNGSF CCCCEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC GHNSFSTSDAQSGRAGDFFIGDVAVHVTTAPGEAVVERCRDNINDGFRPIIVTTARGLTA CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCHH AEVLAENAGLGERIDVFEVEQFVALNLYELGKFAADGRRVAVGDLVTRYNEIIEEVETDP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCC SLKIEFRQ CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA