| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is guaB [H]
Identifier: 74317770
GI number: 74317770
Start: 1844034
End: 1845494
Strand: Reverse
Name: guaB [H]
Synonym: Tbd_1752
Alternate gene names: 74317770
Gene position: 1845494-1844034 (Counterclockwise)
Preceding gene: 74317772
Following gene: 74317769
Centisome position: 63.42
GC content: 66.46
Gene sequence:
>1461_bases ATGCGTGTTCTGCAAAAAGCGCTGACGTTCGACGACGTTCTGCTCGTTCCGGCCCATTCCGCGATTCTGCCGCGCGAAGT CAGCCTCGCCACCCAGTTGACCCGTTCGATCACGCTCAATCTGCCGCTCCTGTCGGCGGCGATGGACACGGTGACTGAAG CGCGCCTCGCGATCGCGCTGGCTCAGGAAGGCGGCATCGGCATCGTCCACAAGAACATGAACACGGCCATGCAGGCCGCG CAGGTGGCCGCAGTCAAACGCTTCGAGTCGGGTGTGGTGAAGGACCCGATCACCGTCGCGCCGCAAATGACCGTCCGCCA GGTGCTCGAGATCACGCGGGCCAAGCGGATTTCGGGATTGCCCGTGATCGAGGACGGACGCGTCGTCGGCATCGTCACCA ACCGCGACCTGCGCTTCGAATCCCGTCTCGACCAGCCCGTGTCGGCGATCATGACGCCGAAGGAACGGCTGGTGACCGTG AAGGAAGGCGCCAACCGTGACGAAGCGATGGCGCTTCTTCACAAGCATCGACTCGAGCGCGTGCTCGTCGTCAACGACGA CTTCGAGTTGCGCGGCCTGATCACCGTCAAGGACATCCAGAAGTCGACCGAGCATCCGCTGGCGTGCAAAGACGCGATGG GTCGTCTGCGTGTCGGCGCCGCGGTCGGCACCGGCGAAGGTACCGAGGAGCGGGTCGCGGCGCTGGTCGAGGCCGGGGTC GATGTCATCGTCGTCGACACGGCGCACGGGCATTCCAAGGGCGTGCTCGAGCGTGTGCGCTGGGTCAAGCAGACGTATCC CGACGTGCAGGTCATCGGCGGCAACATCGCCACCGCCTCGGCGGCCGCGGCCCTGGTCGAACACGGCGCCGACGCGGTCA AGGTCGGCATCGGCCCCGGCTCGATTTGCACCACCCGCATGGTCGCCGGCGTCGGCGTGCCGCAGATCTCGGCGGTCGCC AACGTCGCCGACGCCCTGGCGGGCAGCGGCGTCGGCGTCATCGCCGACGGCGGCATCCGCTACTCAGGCGACATCGCCAA GGCGCTCGCCGCCGGGGCGAACTGCGTCATGCTCGGTGGCCTCCTGGCCGGTACCGAAGAAGCGCCAGGCGAAGTCGAAC TGTTCCAGGGCCGCTCGTACAAGTCCTACCGCGGCATGGGTTCGCTCGGCGCGATGCAGCAAGGCTCGAGTGACCGCTAC TTCCAGGACAACGAAAAGAGCGCCGAGAAGCTCGTTCCCGAGGGGATCGAAGGCCGCGTGCCCTACAAGGGCAGCGTGCT CGGCGTCATCCACCAGATGATGGGCGGGCTGCGCTCGAGCATGGGCTACCTCGGCGTCGCGACGATCACCGACATGCATG CCAAGGCCGAGTTCGTCGAGATCACCTCCGCCGGCGTGCGCGAGTCGCACGTGCACGATGTGCAGATCACGAAGGAAGCG CCCAATTACCGTGTCGAGTGA
Upstream 100 bases:
>100_bases TGGGCTTCACCTTAGTAGATTACGACCAACGGCGCCTGCCCTGCGTTTGTGCCGCGCCGGACTGGCCGCGTATAATTCCG CTTTGCATTAAGGAAAGCCC
Downstream 100 bases:
>100_bases CAGGGATCAGGGGCCAGGATTCAGGGGTCAGGGAAAGTCACGCTGCGCGTGGCTTTTTCTTTTGCGCCACGCCGAATCCA CCCCATCCCTGACCCCTGAA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRVLQKALTFDDVLLVPAHSAILPREVSLATQLTRSITLNLPLLSAAMDTVTEARLAIALAQEGGIGIVHKNMNTAMQAA QVAAVKRFESGVVKDPITVAPQMTVRQVLEITRAKRISGLPVIEDGRVVGIVTNRDLRFESRLDQPVSAIMTPKERLVTV KEGANRDEAMALLHKHRLERVLVVNDDFELRGLITVKDIQKSTEHPLACKDAMGRLRVGAAVGTGEGTEERVAALVEAGV DVIVVDTAHGHSKGVLERVRWVKQTYPDVQVIGGNIATASAAAALVEHGADAVKVGIGPGSICTTRMVAGVGVPQISAVA NVADALAGSGVGVIADGGIRYSGDIAKALAAGANCVMLGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMQQGSSDRY FQDNEKSAEKLVPEGIEGRVPYKGSVLGVIHQMMGGLRSSMGYLGVATITDMHAKAEFVEITSAGVRESHVHDVQITKEA PNYRVE
Sequences:
>Translated_486_residues MRVLQKALTFDDVLLVPAHSAILPREVSLATQLTRSITLNLPLLSAAMDTVTEARLAIALAQEGGIGIVHKNMNTAMQAA QVAAVKRFESGVVKDPITVAPQMTVRQVLEITRAKRISGLPVIEDGRVVGIVTNRDLRFESRLDQPVSAIMTPKERLVTV KEGANRDEAMALLHKHRLERVLVVNDDFELRGLITVKDIQKSTEHPLACKDAMGRLRVGAAVGTGEGTEERVAALVEAGV DVIVVDTAHGHSKGVLERVRWVKQTYPDVQVIGGNIATASAAAALVEHGADAVKVGIGPGSICTTRMVAGVGVPQISAVA NVADALAGSGVGVIADGGIRYSGDIAKALAAGANCVMLGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMQQGSSDRY FQDNEKSAEKLVPEGIEGRVPYKGSVLGVIHQMMGGLRSSMGYLGVATITDMHAKAEFVEITSAGVRESHVHDVQITKEA PNYRVE >Mature_486_residues MRVLQKALTFDDVLLVPAHSAILPREVSLATQLTRSITLNLPLLSAAMDTVTEARLAIALAQEGGIGIVHKNMNTAMQAA QVAAVKRFESGVVKDPITVAPQMTVRQVLEITRAKRISGLPVIEDGRVVGIVTNRDLRFESRLDQPVSAIMTPKERLVTV KEGANRDEAMALLHKHRLERVLVVNDDFELRGLITVKDIQKSTEHPLACKDAMGRLRVGAAVGTGEGTEERVAALVEAGV DVIVVDTAHGHSKGVLERVRWVKQTYPDVQVIGGNIATASAAAALVEHGADAVKVGIGPGSICTTRMVAGVGVPQISAVA NVADALAGSGVGVIADGGIRYSGDIAKALAAGANCVMLGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMQQGSSDRY FQDNEKSAEKLVPEGIEGRVPYKGSVLGVIHQMMGGLRSSMGYLGVATITDMHAKAEFVEITSAGVRESHVHDVQITKEA PNYRVE
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=481, Percent_Identity=40.5405405405405, Blast_Score=346, Evalue=3e-95, Organism=Homo sapiens, GI217035146, Length=451, Percent_Identity=42.350332594235, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI34328928, Length=451, Percent_Identity=42.350332594235, Blast_Score=343, Evalue=3e-94, Organism=Homo sapiens, GI156616279, Length=451, Percent_Identity=42.350332594235, Blast_Score=342, Evalue=4e-94, Organism=Homo sapiens, GI34328930, Length=451, Percent_Identity=42.350332594235, Blast_Score=342, Evalue=5e-94, Organism=Homo sapiens, GI217035152, Length=447, Percent_Identity=42.2818791946309, Blast_Score=336, Evalue=3e-92, Organism=Homo sapiens, GI217035148, Length=451, Percent_Identity=41.6851441241685, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI217035150, Length=451, Percent_Identity=39.9113082039911, Blast_Score=309, Evalue=3e-84, Organism=Homo sapiens, GI156104880, Length=263, Percent_Identity=38.0228136882129, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=39.6761133603239, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI50541954, Length=248, Percent_Identity=39.5161290322581, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI50541952, Length=248, Percent_Identity=39.5161290322581, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI50541948, Length=248, Percent_Identity=39.5161290322581, Blast_Score=172, Evalue=9e-43, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=65.2263374485597, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1786293, Length=243, Percent_Identity=34.5679012345679, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71994385, Length=484, Percent_Identity=36.7768595041322, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71994389, Length=428, Percent_Identity=38.785046728972, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17560440, Length=274, Percent_Identity=34.6715328467153, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=39.6694214876033, Blast_Score=338, Evalue=1e-93, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.0495867768595, Blast_Score=323, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6322012, Length=484, Percent_Identity=38.2231404958678, Blast_Score=322, Evalue=9e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=38.1656804733728, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=112, Percent_Identity=41.9642857142857, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=41.1157024793388, Blast_Score=337, Evalue=8e-93, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=41.1157024793388, Blast_Score=337, Evalue=8e-93, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=41.4027149321267, Blast_Score=301, Evalue=8e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51422; Mature: 51422
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLQKALTFDDVLLVPAHSAILPREVSLATQLTRSITLNLPLLSAAMDTVTEARLAIAL CCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHEEEE AQEGGIGIVHKNMNTAMQAAQVAAVKRFESGVVKDPITVAPQMTVRQVLEITRAKRISGL ECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PVIEDGRVVGIVTNRDLRFESRLDQPVSAIMTPKERLVTVKEGANRDEAMALLHKHRLER CEEECCEEEEEEECCCCCHHHHCCCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCCE VLVVNDDFELRGLITVKDIQKSTEHPLACKDAMGRLRVGAAVGTGEGTEERVAALVEAGV EEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQTYPDVQVIGGNIATASAAAALVEHGADAVKVGIGPG CEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCC SICTTRMVAGVGVPQISAVANVADALAGSGVGVIADGGIRYSGDIAKALAAGANCVMLGG CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHCCCCEEEECC LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMQQGSSDRYFQDNEKSAEKLVPEGIEGRV EEECCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC PYKGSVLGVIHQMMGGLRSSMGYLGVATITDMHAKAEFVEITSAGVRESHVHDVQITKEA CCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCC PNYRVE CCCCCC >Mature Secondary Structure MRVLQKALTFDDVLLVPAHSAILPREVSLATQLTRSITLNLPLLSAAMDTVTEARLAIAL CCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHEEEE AQEGGIGIVHKNMNTAMQAAQVAAVKRFESGVVKDPITVAPQMTVRQVLEITRAKRISGL ECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PVIEDGRVVGIVTNRDLRFESRLDQPVSAIMTPKERLVTVKEGANRDEAMALLHKHRLER CEEECCEEEEEEECCCCCHHHHCCCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCCE VLVVNDDFELRGLITVKDIQKSTEHPLACKDAMGRLRVGAAVGTGEGTEERVAALVEAGV EEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQTYPDVQVIGGNIATASAAAALVEHGADAVKVGIGPG CEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCC SICTTRMVAGVGVPQISAVANVADALAGSGVGVIADGGIRYSGDIAKALAAGANCVMLGG CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHCCCCEEEECC LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMQQGSSDRYFQDNEKSAEKLVPEGIEGRV EEECCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC PYKGSVLGVIHQMMGGLRSSMGYLGVATITDMHAKAEFVEITSAGVRESHVHDVQITKEA CCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCC PNYRVE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA