Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317596

Identifier: 74317596

GI number: 74317596

Start: 1661874

End: 1663463

Strand: Direct

Name: 74317596

Synonym: Tbd_1578

Alternate gene names: NA

Gene position: 1661874-1663463 (Clockwise)

Preceding gene: 74317595

Following gene: 74317597

Centisome position: 57.11

GC content: 72.08

Gene sequence:

>1590_bases
ATGAGCGCCGTCCTCGCCCCCGCCTCGCCGTGGGCTCCGCTGCGCAATCGCGTCTTCCGCATGATGTGGATCGCATCGCT
CGCGTCGAACATCGGCACCTGGATGCACGAGGTCGGCGCGGGCTGGCTCATGACCTCGCTCGCGCCCGACCCGCTCATGG
TCGCGCTCGTACAGGCGGCGGCGACGGCACCGGTATTCCTGCTCGCGCTGCCGGCCGGCGCGCTCGCCGACATCGTCGAC
CGCCGCCGCTACCTGATCGTCTCGCAGCTGTGGATGCTCGTGGCGGCGACGCTGCTCGGCGTGTTCACGCTCGCGGGGGC
CACCAACGCCGCGCTGCTGTTGCTCTTCACCTTCGCGCTCGGCGTCGGCCGGGCGATGATGATGCCGGCCTGGGGCGCGG
TCGTACCCGAGCTCGTGCCGCGATCCGAACTTGCGTCGGCGATCGCGCTGAACTCGATGGGCATGAACGCAGCGCGTTCG
ATGGGCCCCGCGCTCGCCGGCCTGATCGTCGCGTCGGCCGGACCCGGCGCGGTGTTCATGCTCAATGCGCTGTCGTTCCT
CGCCGTCATCGCCGCCTTGAAGACCTGGCAGCGCGCGCCGCAGCCGAGCGAATTGCCGGCCGAGCGTCTGCTCGGCGCCG
TGCGCGCGGGCCTGCGCTACGCCCGCCACTCGCCCGAACTGCGCGCCGTGCTCGTGCGCGAAGCGGCCTTCTTCGTGTTC
GCGAGCGCCGCCTGGGCCTTGTTGCCGCTCATCGTCAGGCAGGAGCTGCAGGCCGGCCCGCGCACCTACGGGCTCTTTCT
CGCCTGCATGGGCGTCGGCGCGGTCACCGGCGCGCTGCTGCTGCCGCGACTCCACGCGCGCGCCTCGCGTGACCGCGTCG
TCGCCGGCGCGACTGTGCTGCACGCGCTTGCCCTGCTCGCGCTCGCCCACAGCGGCAGCCTCGTCGCCGCGGGCGCGGCG
ATGGTGCTGATCGGCATCGCCTGGATCAGCGTCGTCTCCTCGCTCATGACCGCGGCGCAGACCGCCCTGCCACGCTGGGT
GCGCGCGCGCGGACTCGCGCTTTTCTGGGTGTTTTTCACGGGCGGGATGGCCGCCGGCAGCACGCTCTGGGGTCAGGTCG
CCTCGTCGACGGACATTCCGACCGCGCTCACGGCGGCGGCCATCGGCGCGCTCGCCGGCATCGTGCTCACGCGTCGATAC
CACATTGGCCGCCACGATGTCGCCGACCTCTCGCCCTCGCAGCACTGGCCGAACCCGACCGGCCACGACGACGTCGGCCG
CGACCGCGGGCCGGTCATGGTGACCGTCGAGTACCGGATCGATCCCGCGCGCGCGACCGAATTCACCCGGCTCCTCCAGC
GCGTGCGCCGCATTCGCCGGCGCGACGGCGCGTTCATGTGGGAACTCTTCAGCGACGTCGCCGAGCCGGGGCGCATGCTC
GAATGTTTCATGGTCGAATCCTGGCTCGAGCACCTGCGCCAGCACGAGCGCGTCACCGTCGCCGACCGCGAATTGCTCGA
AGCGGCGCGCGCCTTCCACCTCGGCGACGCGCCGCCGGTCGTCACGCATCTCGTCGCCGAGACGCGCTGA

Upstream 100 bases:

>100_bases
CACGGGTGGTCGTTCGAAGCGGGGGTGCCGCGGTGCTTCCCGGCTTGCCGCGCGCTGCATCGCGCCAAACACGAGCGCGG
CGGCACCTGACCCTGCGCAC

Downstream 100 bases:

>100_bases
CGCCGTGGTGCCGATTCACGAGCTCCTCAACCGCCTGCGCTGGGACCCGGCGTTCGCCCGAGGCGGCTTCGTCCTCGGCT
ACTACGATCGCGTCGCCGAC

Product: MFS family transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Multidrug ABC Transporter; MFS Transporter; Transmembrane Efflux Protein; Permease; Mfs Transporter; Transporter Facilitator Family; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Transport Transmembrane Protein; Permeases Of Facilitator Superfamily; MFS Family Transporter Protein; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSAVLAPASPWAPLRNRVFRMMWIASLASNIGTWMHEVGAGWLMTSLAPDPLMVALVQAAATAPVFLLALPAGALADIVD
RRRYLIVSQLWMLVAATLLGVFTLAGATNAALLLLFTFALGVGRAMMMPAWGAVVPELVPRSELASAIALNSMGMNAARS
MGPALAGLIVASAGPGAVFMLNALSFLAVIAALKTWQRAPQPSELPAERLLGAVRAGLRYARHSPELRAVLVREAAFFVF
ASAAWALLPLIVRQELQAGPRTYGLFLACMGVGAVTGALLLPRLHARASRDRVVAGATVLHALALLALAHSGSLVAAGAA
MVLIGIAWISVVSSLMTAAQTALPRWVRARGLALFWVFFTGGMAAGSTLWGQVASSTDIPTALTAAAIGALAGIVLTRRY
HIGRHDVADLSPSQHWPNPTGHDDVGRDRGPVMVTVEYRIDPARATEFTRLLQRVRRIRRRDGAFMWELFSDVAEPGRML
ECFMVESWLEHLRQHERVTVADRELLEAARAFHLGDAPPVVTHLVAETR

Sequences:

>Translated_529_residues
MSAVLAPASPWAPLRNRVFRMMWIASLASNIGTWMHEVGAGWLMTSLAPDPLMVALVQAAATAPVFLLALPAGALADIVD
RRRYLIVSQLWMLVAATLLGVFTLAGATNAALLLLFTFALGVGRAMMMPAWGAVVPELVPRSELASAIALNSMGMNAARS
MGPALAGLIVASAGPGAVFMLNALSFLAVIAALKTWQRAPQPSELPAERLLGAVRAGLRYARHSPELRAVLVREAAFFVF
ASAAWALLPLIVRQELQAGPRTYGLFLACMGVGAVTGALLLPRLHARASRDRVVAGATVLHALALLALAHSGSLVAAGAA
MVLIGIAWISVVSSLMTAAQTALPRWVRARGLALFWVFFTGGMAAGSTLWGQVASSTDIPTALTAAAIGALAGIVLTRRY
HIGRHDVADLSPSQHWPNPTGHDDVGRDRGPVMVTVEYRIDPARATEFTRLLQRVRRIRRRDGAFMWELFSDVAEPGRML
ECFMVESWLEHLRQHERVTVADRELLEAARAFHLGDAPPVVTHLVAETR
>Mature_528_residues
SAVLAPASPWAPLRNRVFRMMWIASLASNIGTWMHEVGAGWLMTSLAPDPLMVALVQAAATAPVFLLALPAGALADIVDR
RRYLIVSQLWMLVAATLLGVFTLAGATNAALLLLFTFALGVGRAMMMPAWGAVVPELVPRSELASAIALNSMGMNAARSM
GPALAGLIVASAGPGAVFMLNALSFLAVIAALKTWQRAPQPSELPAERLLGAVRAGLRYARHSPELRAVLVREAAFFVFA
SAAWALLPLIVRQELQAGPRTYGLFLACMGVGAVTGALLLPRLHARASRDRVVAGATVLHALALLALAHSGSLVAAGAAM
VLIGIAWISVVSSLMTAAQTALPRWVRARGLALFWVFFTGGMAAGSTLWGQVASSTDIPTALTAAAIGALAGIVLTRRYH
IGRHDVADLSPSQHWPNPTGHDDVGRDRGPVMVTVEYRIDPARATEFTRLLQRVRRIRRRDGAFMWELFSDVAEPGRMLE
CFMVESWLEHLRQHERVTVADRELLEAARAFHLGDAPPVVTHLVAETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56647; Mature: 56516

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVLAPASPWAPLRNRVFRMMWIASLASNIGTWMHEVGAGWLMTSLAPDPLMVALVQAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
ATAPVFLLALPAGALADIVDRRRYLIVSQLWMLVAATLLGVFTLAGATNAALLLLFTFAL
HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVGRAMMMPAWGAVVPELVPRSELASAIALNSMGMNAARSMGPALAGLIVASAGPGAVFM
HHCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
LNALSFLAVIAALKTWQRAPQPSELPAERLLGAVRAGLRYARHSPELRAVLVREAAFFVF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ASAAWALLPLIVRQELQAGPRTYGLFLACMGVGAVTGALLLPRLHARASRDRVVAGATVL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
HALALLALAHSGSLVAAGAAMVLIGIAWISVVSSLMTAAQTALPRWVRARGLALFWVFFT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGMAAGSTLWGQVASSTDIPTALTAAAIGALAGIVLTRRYHIGRHDVADLSPSQHWPNPT
CCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GHDDVGRDRGPVMVTVEYRIDPARATEFTRLLQRVRRIRRRDGAFMWELFSDVAEPGRML
CCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH
ECFMVESWLEHLRQHERVTVADRELLEAARAFHLGDAPPVVTHLVAETR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SAVLAPASPWAPLRNRVFRMMWIASLASNIGTWMHEVGAGWLMTSLAPDPLMVALVQAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
ATAPVFLLALPAGALADIVDRRRYLIVSQLWMLVAATLLGVFTLAGATNAALLLLFTFAL
HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVGRAMMMPAWGAVVPELVPRSELASAIALNSMGMNAARSMGPALAGLIVASAGPGAVFM
HHCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHH
LNALSFLAVIAALKTWQRAPQPSELPAERLLGAVRAGLRYARHSPELRAVLVREAAFFVF
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ASAAWALLPLIVRQELQAGPRTYGLFLACMGVGAVTGALLLPRLHARASRDRVVAGATVL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
HALALLALAHSGSLVAAGAAMVLIGIAWISVVSSLMTAAQTALPRWVRARGLALFWVFFT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGMAAGSTLWGQVASSTDIPTALTAAAIGALAGIVLTRRYHIGRHDVADLSPSQHWPNPT
CCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GHDDVGRDRGPVMVTVEYRIDPARATEFTRLLQRVRRIRRRDGAFMWELFSDVAEPGRML
CCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH
ECFMVESWLEHLRQHERVTVADRELLEAARAFHLGDAPPVVTHLVAETR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA