Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yceF [C]

Identifier: 74317575

GI number: 74317575

Start: 1641233

End: 1641838

Strand: Direct

Name: yceF [C]

Synonym: Tbd_1557

Alternate gene names: 74317575

Gene position: 1641233-1641838 (Clockwise)

Preceding gene: 74317574

Following gene: 74317576

Centisome position: 56.4

GC content: 68.48

Gene sequence:

>606_bases
ATGACGCGCACGAGCCCCACGCTCGTCCTCGCCTCGACCTCGCGCTACCGGCGCGAACTGTTGGCGCGGCTCCGCCTGCC
CTTCGAGGTGCTCGCGCCGAACGTCGACGAGACGCCGCTACCCGGCGAAACGCGCTCGGCGACCGCACTGCGGCTGTCGG
TGCTCAAGGCGCAGGCCGCCGCAATGACCCATCGCGATGCGCTGGTCATCGGCTCCGACCAGGTCCTGATGCTCGGCACC
GAACAGCTCGGCAAGCCGGGCGACCATGAGCGCGCCTTCGCCCAGCTCAAGAAGATGCAGGGTCGCGCAATGGTCTTCCA
CACCGCGCTCACGCTGCTCAACAGTCGCACGGGCTCGGTGCAGACGCGCGACGTGCCGACGGTCGTGCACATTCGCCCGC
TCACCGACGCCCAGATCGAGGCCTACCTAAAAAAGGAGCAGCCCTACGATTGCGCGGGCTCGGCGAAGAGCGAGGCGCTC
GGGATCGCGCTCATGGAGCGCATGGAGAGTCCCGACCCCACGGCATTGATCGGCCTGCCGCTGATGGCGCTGACCGAGAT
GCTCGCCCAGGAAGGCGTCGACGTTCTCACCTGGCCGGCGACGTAG

Upstream 100 bases:

>100_bases
GCGAAGTCCAGGCGCCGATCGCCGGTGTCGTCATCAACCTGTTCGCCAAGAAAGGCGACGCGGTGACGCCCGACATGGCG
CTCGTCGAGATCCAGCCCGC

Downstream 100 bases:

>100_bases
TCCGCGTGGCCACGCTGTACCTGATCCCAGTGCCGCTCGGGCCGGTCAGCCCCGAGTCCTGTCTTCCCGCCGACACGCTC
GCGGTCGCCCGCCGCCTCGA

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTRTSPTLVLASTSRYRRELLARLRLPFEVLAPNVDETPLPGETRSATALRLSVLKAQAAAMTHRDALVIGSDQVLMLGT
EQLGKPGDHERAFAQLKKMQGRAMVFHTALTLLNSRTGSVQTRDVPTVVHIRPLTDAQIEAYLKKEQPYDCAGSAKSEAL
GIALMERMESPDPTALIGLPLMALTEMLAQEGVDVLTWPAT

Sequences:

>Translated_201_residues
MTRTSPTLVLASTSRYRRELLARLRLPFEVLAPNVDETPLPGETRSATALRLSVLKAQAAAMTHRDALVIGSDQVLMLGT
EQLGKPGDHERAFAQLKKMQGRAMVFHTALTLLNSRTGSVQTRDVPTVVHIRPLTDAQIEAYLKKEQPYDCAGSAKSEAL
GIALMERMESPDPTALIGLPLMALTEMLAQEGVDVLTWPAT
>Mature_200_residues
TRTSPTLVLASTSRYRRELLARLRLPFEVLAPNVDETPLPGETRSATALRLSVLKAQAAAMTHRDALVIGSDQVLMLGTE
QLGKPGDHERAFAQLKKMQGRAMVFHTALTLLNSRTGSVQTRDVPTVVHIRPLTDAQIEAYLKKEQPYDCAGSAKSEALG
IALMERMESPDPTALIGLPLMALTEMLAQEGVDVLTWPAT

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=49.738219895288, Blast_Score=180, Evalue=5e-47,
Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=34.5945945945946, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1557_THIDA (Q3SIL8)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_315315.1
- ProteinModelPortal:   Q3SIL8
- STRING:   Q3SIL8
- GeneID:   3672037
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1557
- NMPDR:   fig|292415.3.peg.1556
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   EFHSALA
- PhylomeDB:   Q3SIL8
- BioCyc:   TDEN292415:TBD_1557-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21915; Mature: 21784

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: ACT_SITE 37-37

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTSPTLVLASTSRYRRELLARLRLPFEVLAPNVDETPLPGETRSATALRLSVLKAQAA
CCCCCCEEEEECCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AMTHRDALVIGSDQVLMLGTEQLGKPGDHERAFAQLKKMQGRAMVFHTALTLLNSRTGSV
HHHCCCEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCE
QTRDVPTVVHIRPLTDAQIEAYLKKEQPYDCAGSAKSEALGIALMERMESPDPTALIGLP
EECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHH
LMALTEMLAQEGVDVLTWPAT
HHHHHHHHHHCCCCEEECCCC
>Mature Secondary Structure 
TRTSPTLVLASTSRYRRELLARLRLPFEVLAPNVDETPLPGETRSATALRLSVLKAQAA
CCCCCEEEEECCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AMTHRDALVIGSDQVLMLGTEQLGKPGDHERAFAQLKKMQGRAMVFHTALTLLNSRTGSV
HHHCCCEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCE
QTRDVPTVVHIRPLTDAQIEAYLKKEQPYDCAGSAKSEALGIALMERMESPDPTALIGLP
EECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHH
LMALTEMLAQEGVDVLTWPAT
HHHHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA