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The map label for this gene is rsmI [H]

Identifier: 74317576

GI number: 74317576

Start: 1641844

End: 1642545

Strand: Direct

Name: rsmI [H]

Synonym: Tbd_1558

Alternate gene names: 74317576

Gene position: 1641844-1642545 (Clockwise)

Preceding gene: 74317575

Following gene: 74317582

Centisome position: 56.42

GC content: 69.23

Gene sequence:

>702_bases
GTGGCCACGCTGTACCTGATCCCAGTGCCGCTCGGGCCGGTCAGCCCCGAGTCCTGTCTTCCCGCCGACACGCTCGCGGT
CGCCCGCCGCCTCGAGCATTTCGTCGTCGAGCGCGCCAAGACCGCACGCGCGCACCTGAAGGCGATGGACCATCCGCTAC
CTCTGCAGTCGCTGCATCTCAGCGAACTCAACGAGCACACGCCGGCCGACGCCATTGGCGCCCTGCTCGCGCCGCTGCAA
GCCGGGCACGATCTCGGTCTGCTCTCGGAAGCGGGCTGCCCCGCTGTCGCCGACCCGGGCGCGGCCCTTGTGCTGGCGGC
GCATCGCGCGGGGTTCCGGGTCGTGCCGCTCGTCGGACCTTCGTCGATTCTGCTCGCGCTAATGGCGTCGGGCCTCGGCG
GTCAACGCTTCGCCTTCCACGGCTATCTGCCCGCGAAAGAACCCGAGCGCGTGCAAAGGATTCGCGAACTCGAAAAAGCT
GCGCGCCGCGACCGCGCTACCCAGCTCTTCATCGAAACGCCTTACCGCAGCGCCGCGCTGCTGGACGCGCTCGCCGCCAC
ACTCGCACCCGACACGCTCATCAGCGTCGGCGCCGACCTGAGCCTGCCGTCTCAATTGATCAGAACGCTTGACGCCAAAT
CCTGGCGCGGCCGGAGCGGCGAGTTCCGCGATCGCCTGGTCGTCTTCGCCGTCGCGGCGTGA

Upstream 100 bases:

>100_bases
CCGACCCCACGGCATTGATCGGCCTGCCGCTGATGGCGCTGACCGAGATGCTCGCCCAGGAAGGCGTCGACGTTCTCACC
TGGCCGGCGACGTAGTCCGC

Downstream 100 bases:

>100_bases
TTGCCACGCGGCTGAGGCGCGGGGCGGGTTATAGCCGACGCGAGCCGCAGTGTCGAAGTCCTGTGAACACGGCGAGAAGC
AGCGACCGCTACCGATCAAC

Product: transmembrane protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MATLYLIPVPLGPVSPESCLPADTLAVARRLEHFVVERAKTARAHLKAMDHPLPLQSLHLSELNEHTPADAIGALLAPLQ
AGHDLGLLSEAGCPAVADPGAALVLAAHRAGFRVVPLVGPSSILLALMASGLGGQRFAFHGYLPAKEPERVQRIRELEKA
ARRDRATQLFIETPYRSAALLDALAATLAPDTLISVGADLSLPSQLIRTLDAKSWRGRSGEFRDRLVVFAVAA

Sequences:

>Translated_233_residues
MATLYLIPVPLGPVSPESCLPADTLAVARRLEHFVVERAKTARAHLKAMDHPLPLQSLHLSELNEHTPADAIGALLAPLQ
AGHDLGLLSEAGCPAVADPGAALVLAAHRAGFRVVPLVGPSSILLALMASGLGGQRFAFHGYLPAKEPERVQRIRELEKA
ARRDRATQLFIETPYRSAALLDALAATLAPDTLISVGADLSLPSQLIRTLDAKSWRGRSGEFRDRLVVFAVAA
>Mature_232_residues
ATLYLIPVPLGPVSPESCLPADTLAVARRLEHFVVERAKTARAHLKAMDHPLPLQSLHLSELNEHTPADAIGALLAPLQA
GHDLGLLSEAGCPAVADPGAALVLAAHRAGFRVVPLVGPSSILLALMASGLGGQRFAFHGYLPAKEPERVQRIRELEKAA
RRDRATQLFIETPYRSAALLDALAATLAPDTLISVGADLSLPSQLIRTLDAKSWRGRSGEFRDRLVVFAVAA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=204, Percent_Identity=31.3725490196078, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 24812; Mature: 24681

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLYLIPVPLGPVSPESCLPADTLAVARRLEHFVVERAKTARAHLKAMDHPLPLQSLHL
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SELNEHTPADAIGALLAPLQAGHDLGLLSEAGCPAVADPGAALVLAAHRAGFRVVPLVGP
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCH
SSILLALMASGLGGQRFAFHGYLPAKEPERVQRIRELEKAARRDRATQLFIETPYRSAAL
HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH
LDALAATLAPDTLISVGADLSLPSQLIRTLDAKSWRGRSGEFRDRLVVFAVAA
HHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
ATLYLIPVPLGPVSPESCLPADTLAVARRLEHFVVERAKTARAHLKAMDHPLPLQSLHL
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SELNEHTPADAIGALLAPLQAGHDLGLLSEAGCPAVADPGAALVLAAHRAGFRVVPLVGP
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCH
SSILLALMASGLGGQRFAFHGYLPAKEPERVQRIRELEKAARRDRATQLFIETPYRSAAL
HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH
LDALAATLAPDTLISVGADLSLPSQLIRTLDAKSWRGRSGEFRDRLVVFAVAA
HHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]